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  1. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S2178.g09354.01.t

Possible name(s)

MMS19

Gene model

Haaura.CG.MTP2014.S2178.g09354

Location

S2178 [6,982 / 11,784]

Sequences

Amino acid sequence

Length: 1,105

>Haaura.CG.MTP2014.S2178.g09354.01.p
MDDIVKSYMGDDGSDYNGIVSKIVNGDSTFLDMIESLQQHLTSTEVGKRIKACELISNVL
TNLNKSIIKPQESAAIVSFLCCRLQDHFSVHSAALAALAVMSSYDNLSPGSAELILRTIF
KEVHAPSYMQTARRSIYVIISGLLENYKQEVLAIGGDFVYSFISIVDGEQDPRNLLHVFD
LAYDIIKTGFDISKCVEEFFDVISCYFPIDFEPPTSLTDRKVISNEQLVQGLRKVISSTH
LFAPHCIPLMIEKMESNVLNAKLDAMRTLKECLKIYSVVDLRMFLRSLWICIRREIMYAE
AEDVETMGQFLITDIVSILSRSPHSSSGESNPELNSFIKDVLEECLPKLTGQLQEKISWS
SAKLLIACAKASKVPCCKLFRVVLPVLISNLKNKNLNIAERRLTMEILVNVLKTISEFEF
TEDLEFHPLHDHNNDVVEIICSCIASDSFQLIRTVAFAGSAALCDHGSVLSAENKLKLVQ
SIVFCIKHEQNDQLTADLRAAAGYLSMKWSDLAVDYIFPVLSKSVENFFISDIRTLKKDF
LYLSSISTHPDVIKVVSELLLKAILSETVTEKTSGRFEMVLDCVSDIVNANAGDPKCIKY
FSDALVLPLVKVCVKMSLVPVLPEQCCSCCSELQNFSSKCVTQPVIQKVANILRTVCQNM
KPDKRAQDICDALTTVFVDCDLKCLDIESAESYTFSPLTSVEQTLQTRLISLLVATQCSF
VMDVKIKSMDVLLDRLLSLSQNTMDHLSYVSASKCIAGLLNKQKVVPEDFMNKVLKLGKS
IAHQTPGQEDEASQATSVRTLSLLVWFVKCLVLRSHEKTMEFTSILFSLFSDRNLGRMSA
DSFDIILRDTEEVLNSSSHAMIRLMYRQRFFQSALPTLIDGFRAVENDSNGESAMETNQT
TNTDSSATKANYLTALSHFLMYLPKQVLHQHLASLLPMLVKSLRSSEGPLLESVLSTLYS
LVQEDKSSIEPHVMMLLDHFLELASFPSYVPVRIKACSCIGVMTLLQVSVILPHKPRIIK
ALTKPLNDKKRLVRKEASKARSEWCLLGDVSILNYNDLLPNRRIEDKKLTTEITNYFKRR
SAFLFVEQYFKQELNCTTLRFNECR

Nucleotide sequence

Length: 3,315

>Haaura.CG.MTP2014.S2178.g09354.01.t
ATGGATGATATTGTTAAAAGCTATATGGGAGATGATGGATCAGATTATAATGGTATTGTG
TCAAAGATAGTGAATGGGGATTCGACCTTTCTAGACATGATTGAATCTCTACAACAGCAC
CTGACCAGTACTGAAGTTGGTAAAAGAATAAAGGCTTGTGAGCTCATATCAAACGTGCTT
ACTAACCTCAACAAGAGCATCATAAAACCTCAAGAATCAGCAGCGATCGTAAGTTTCCTG
TGCTGTCGTCTCCAGGATCACTTCTCGGTTCATTCGGCCGCTTTAGCTGCGTTGGCTGTA
ATGAGCTCGTATGATAATCTTTCTCCAGGATCTGCAGAACTGATCCTAAGAACTATATTC
AAAGAGGTCCATGCGCCTTCGTATATGCAGACTGCGAGGCGTTCTATATACGTTATTATT
TCAGGACTGCTGGAGAATTACAAGCAGGAGGTACTAGCTATTGGTGGTGACTTTGTTTAC
AGCTTTATTTCGATCGTTGATGGGGAACAAGACCCCCGAAATCTGTTACATGTCTTTGAC
TTGGCGTACGACATCATCAAAACCGGCTTTGACATATCTAAATGTGTAGAAGAATTTTTT
GACGTAATCAGCTGCTATTTCCCTATTGATTTTGAACCGCCAACCAGTTTGACGGACAGA
AAAGTGATCTCAAACGAACAGCTTGTGCAGGGGTTGAGGAAGGTCATATCCTCCACGCAT
CTGTTCGCACCGCATTGTATTCCGCTCATGATAGAAAAAATGGAATCGAACGTCCTGAAT
GCTAAGCTAGATGCGATGAGAACTCTGAAAGAGTGTCTTAAGATATACTCTGTTGTCGAT
TTGAGGATGTTTCTGAGATCCCTTTGGATTTGCATCAGACGTGAGATCATGTATGCCGAG
GCAGAAGATGTGGAAACGATGGGTCAATTCCTGATAACAGATATCGTGTCAATCTTATCG
AGATCACCCCATTCGAGCAGCGGAGAATCGAATCCCGAACTCAACTCCTTCATAAAAGAC
GTTCTAGAAGAATGTCTTCCCAAGTTGACCGGACAACTGCAGGAAAAAATATCCTGGTCT
TCTGCAAAATTGCTAATCGCATGTGCCAAAGCCAGTAAGGTGCCTTGTTGTAAGTTGTTT
CGTGTGGTTTTGCCAGTTCTAATCAGTAACTTGAAAAACAAGAATTTGAATATTGCTGAA
AGGAGATTGACCATGGAAATACTAGTCAATGTCCTGAAAACTATATCAGAGTTCGAATTC
ACAGAGGATCTTGAATTTCATCCTTTGCACGACCATAATAATGATGTGGTTGAGATTATT
TGTTCGTGTATAGCTTCGGACTCGTTCCAGCTGATACGAACTGTCGCATTCGCAGGATCG
GCTGCGTTGTGTGATCACGGTTCTGTTTTGTCTGCAGAAAACAAACTTAAACTGGTGCAG
AGCATTGTATTTTGCATAAAACACGAACAGAACGATCAGTTGACAGCTGACCTTCGAGCT
GCTGCCGGATATCTTTCTATGAAGTGGTCAGATTTAGCAGTGGACTACATATTCCCCGTT
CTTTCTAAATCTGTAGAAAACTTTTTCATCAGCGATATACGCACATTGAAGAAAGATTTT
CTATACCTCTCCTCCATTTCAACCCATCCAGACGTGATCAAAGTCGTGTCCGAACTTCTT
TTGAAGGCGATTCTTTCGGAAACCGTCACCGAGAAAACATCGGGCCGCTTCGAAATGGTT
TTAGATTGTGTCTCTGATATAGTAAATGCCAATGCCGGAGACCCTAAGTGCATCAAATAT
TTCTCTGATGCCCTCGTACTTCCACTGGTTAAAGTGTGTGTCAAAATGTCGCTCGTTCCC
GTGCTTCCCGAACAGTGTTGTTCTTGCTGCAGCGAGTTGCAGAATTTTTCAAGTAAATGC
GTCACACAGCCAGTAATTCAAAAGGTGGCCAACATACTCAGAACCGTATGCCAAAATATG
AAACCAGATAAACGTGCCCAGGATATCTGCGATGCCTTGACCACGGTTTTCGTGGACTGT
GATTTAAAATGCCTCGATATTGAATCAGCAGAGTCGTACACTTTCAGTCCTCTCACATCT
GTTGAACAGACTCTTCAAACCCGTCTCATATCTTTGCTAGTTGCCACCCAATGTTCTTTT
GTCATGGACGTGAAAATTAAGAGCATGGATGTTTTGCTGGATAGATTACTCAGTCTGTCG
CAAAACACGATGGATCACCTGTCGTATGTATCTGCCTCCAAGTGCATCGCAGGTTTATTG
AACAAGCAGAAGGTTGTGCCAGAAGATTTTATGAACAAGGTGTTGAAGCTAGGGAAAAGT
ATAGCTCATCAAACACCCGGTCAAGAAGATGAAGCGAGTCAAGCTACCTCAGTCCGAACT
TTGAGTTTATTGGTTTGGTTCGTCAAGTGCCTCGTGCTTCGTTCCCATGAAAAAACAATG
GAGTTCACCAGCATCCTCTTTAGCCTTTTTTCAGACAGAAATTTGGGCAGAATGTCAGCT
GATAGCTTTGATATAATCCTTAGGGACACAGAGGAGGTTCTGAATTCATCTTCTCATGCA
ATGATTCGTCTAATGTATCGCCAGAGATTCTTCCAGTCCGCTCTGCCGACTCTTATCGAC
GGCTTCCGGGCAGTCGAGAATGACAGCAATGGGGAATCGGCCATGGAAACTAACCAAACT
ACCAACACAGATTCGTCTGCCACTAAGGCGAATTATTTAACAGCCCTTTCACATTTCTTG
ATGTATCTTCCAAAGCAGGTACTTCATCAGCATCTTGCAAGCCTGCTCCCAATGCTTGTC
AAATCTTTAAGGAGTAGTGAAGGTCCATTGCTTGAGTCAGTTTTGTCTACACTGTACAGC
CTCGTTCAAGAAGATAAGTCATCCATTGAACCTCACGTAATGATGCTTCTGGATCACTTC
CTCGAACTCGCATCATTTCCCTCCTACGTTCCAGTGCGAATTAAGGCCTGCAGTTGCATT
GGGGTAATGACGCTTCTTCAGGTCAGTGTTATTCTACCTCACAAACCAAGGATCATCAAG
GCATTGACGAAACCGTTAAACGACAAGAAACGTCTGGTTCGTAAAGAGGCCTCCAAAGCC
CGTAGTGAATGGTGTTTGCTAGGAGACGTATCGATATTAAACTACAACGATTTATTACCC
AACAGAAGAATTGAAGATAAAAAGCTTACCACAGAAATTACAAATTACTTCAAGCGAAGA
AGCGCATTTCTTTTTGTTGAACAGTACTTTAAGCAAGAGTTAAATTGCACAACTCTTAGG
TTTAACGAATGCAGG

InterProScan

SUPERFAMILY
ARM-type_fold (IPR016024) - T[27-187] 4.3E-10 - T[234-276] 4.3E-10 - T[335-417] 4.3E-10 - T[339-834] 9.05E-24 - T[906-1056] 9.05E-24
Pfam
MMS19_C (IPR024687) - T[542-983] 6.9E-68
Gene3D
ARM-like (IPR011989) - T[895-1060] 4.2E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MMS19_HUMAN 32.67 % 457 2.23E-143