- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'Cisavi.CG.ENS81.R60....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S2089.g09260.01.t
Possible name(s)
SMG5; SMG6; SMG7
Gene model
Location
S2089 [7,102 / 14,440]
Amino acid sequence
Length: 1,253
>Haaura.CG.MTP2014.S2089.g09260.01.p
MNDRVLPTVRLDEKTLWKLHEKLGKLKSKENCPTPNNEGNLTTPRTRSSRAPKYQVYQAG
VSRLSNRKLAPTFDRATVEKSRDNFEGKTEQKNKLDTPTQDGDRDRRPQENWTSNSGGGN
RRPRRTNYHRNENRRSNQGQQVKSQHWQSEAQKNKDYSDEENEDDELAWDNYGESDLGTW
SPQVTAGASSIDGGHSDAELYKDLSEDEKKPAAISVVKELHNSGRSRANSEEDTPSAASS
EPNKEYYKVAHAASSQSEAEYEEEFEEDYNDQHEFSNEIRKSIDHHASSVTQDPSKKRLF
DPKNPNKPIVIKGLKGDRNDGCEYMAPTSGDNAYSPGFMREKLMKKIKVTRPRQRRPRSP
PRYYGNYYPEDDNDELDRRWMDPHSPAGNYRRTSEDLSEDDDAIASQMQSIHRQSCVSML
TEAERHEATLANILLTPSFDSQEYNESLTRVRNKLKVLYENIIVHDVETSSKHSIDQHLW
RNVFYQVIEILREQIRACPEQETSELKINLILLLDQGRAFYENLLERLQQKYRFNLKDIL
SNVASRKKLMSDGRRRTKLSLLSSQRIFICLGDIARYREQANDSSNYGRAKHYYLQAQIL
APKNGRPYNQLAVLAVKTRNKLDAVYYYVRSLAASNPILTARESLMVLFDEIRRRLEYVK
RRKDEDSNAKEMANLKLAAKKDAGQKNKSDSPTRRWEEVWILPGSVQEEVVPASKLEQET
PDFDELKLPPQDVAKHFVLLFLNAHGKLFTRIGLETFSEILTKTLRLFAATLEVPKIMTS
QRMLQLYAINLFSVYNAERLSVHGSVQDSTQNLHQALRLTFSVFAVTIEQINKFFELNSE
DSDLFLSEHLCMLLPAVKIMFDWMYANKDFWYPPAKDLTEHGIDLWKNLAKLCNWICNHE
STKHSTRIFSTADPELQEVFLPEDALLAGFSPLGQAFSDPRYVSLDKALTESETKSYVRQ
CVRINLIKEFLEYLCGMEEPLLAFKQGVYVPVSTHSLNNWSDRLHQDDDFDPSDYDFEDY
SNLAVGNSFSEQTSSIDHDKEELKELMKYRDSLQMTKNLQEKRHSEIQSSLDRDEKVKLE
ICPKNLVPDTNCFIDHLNLIKRIIRSEKYKICMPLVVISELEGLATEKKGSSDHAKNVHH
NAKSAIEFIKVCFASNNSRFCALTKRGTELNSLQFRSEDTHLVGSNDDFILQSAQGHSTT
LSSKTDRVSEGMRIVRRSVVLLTDDRNLRLKALLLRDVPTKGIVEFCKWAKI*
Nucleotide sequence
Length: 3,759
>Haaura.CG.MTP2014.S2089.g09260.01.t
ATGAATGATCGGGTCTTACCAACTGTACGACTCGATGAAAAGACTTTATGGAAACTTCAT
GAAAAGCTCGGTAAACTCAAATCAAAAGAAAACTGTCCGACGCCAAACAACGAAGGTAAT
TTAACAACTCCGAGAACGAGAAGTTCGAGGGCTCCGAAATATCAGGTATATCAAGCTGGT
GTGTCAAGGTTGTCCAATCGGAAATTAGCCCCAACTTTCGATCGAGCGACGGTTGAAAAA
TCAAGAGATAATTTCGAAGGGAAAACAGAACAGAAAAATAAGCTAGATACTCCGACACAA
GATGGCGATAGAGATCGTAGACCTCAAGAGAACTGGACATCGAATTCTGGGGGCGGAAAC
AGGAGACCTCGTCGCACAAACTACCATAGGAATGAGAACAGAAGGTCAAACCAAGGTCAG
CAGGTCAAGAGTCAGCATTGGCAAAGCGAGGCGCAAAAAAACAAAGATTACAGTGATGAA
GAAAACGAAGATGACGAGCTTGCTTGGGATAATTACGGAGAATCAGATTTAGGTACCTGG
AGTCCTCAAGTAACAGCGGGTGCATCCAGCATTGATGGAGGACATTCTGATGCTGAACTC
TATAAAGATCTGAGTGAAGACGAAAAGAAACCTGCTGCCATATCTGTTGTTAAAGAGCTT
CACAACAGCGGTCGAAGTCGAGCCAATTCAGAAGAAGACACTCCTTCTGCAGCGTCAAGT
GAACCAAACAAGGAATATTATAAAGTTGCACATGCAGCATCCTCACAATCTGAAGCAGAA
TATGAAGAGGAATTCGAAGAAGATTATAATGATCAACATGAATTTTCAAATGAAATCAGA
AAGAGCATTGATCACCATGCGTCATCCGTGACCCAAGACCCTTCGAAGAAACGACTTTTC
GACCCCAAAAATCCAAACAAACCGATCGTGATCAAGGGGTTGAAGGGAGACAGGAACGAT
GGGTGCGAGTACATGGCCCCAACGTCAGGCGACAACGCGTACAGCCCCGGTTTCATGAGG
GAAAAGCTTATGAAGAAAATTAAAGTCACTAGACCGAGACAGCGAAGACCTCGCTCTCCC
CCTCGTTACTACGGCAACTATTACCCTGAGGATGACAATGATGAATTGGACAGGAGATGG
ATGGACCCACACAGCCCTGCTGGGAACTACAGACGAACTTCTGAAGATTTGTCCGAAGAT
GATGATGCAATCGCGTCGCAGATGCAAAGCATTCATCGTCAGTCATGCGTTTCCATGCTC
ACAGAAGCGGAACGTCACGAGGCAACTCTGGCGAACATTTTATTGACTCCGTCTTTCGAC
AGCCAGGAGTACAACGAGAGCTTGACAAGGGTTCGAAATAAACTAAAAGTTTTGTACGAG
AATATAATCGTTCATGATGTAGAGACTTCGTCAAAGCATAGCATTGATCAGCATCTTTGG
AGGAATGTTTTTTATCAGGTTATTGAAATATTGAGAGAGCAAATTCGAGCGTGTCCTGAA
CAAGAAACATCCGAGCTCAAAATTAATCTGATTCTTCTCCTGGATCAAGGCCGAGCATTT
TACGAAAACTTGCTCGAACGTTTGCAACAGAAATACCGATTCAATCTCAAAGATATTCTG
AGCAACGTTGCGAGTCGCAAGAAACTGATGAGCGACGGAAGACGAAGGACAAAACTATCG
TTGCTAAGCAGCCAACGAATATTTATCTGTCTCGGAGATATCGCAAGATACAGGGAGCAA
GCGAATGATTCTTCTAATTATGGAAGAGCAAAGCATTACTATTTGCAAGCCCAGATATTA
GCACCGAAGAATGGTCGTCCGTACAATCAACTTGCCGTCCTTGCTGTTAAAACACGAAAC
AAATTAGACGCAGTTTACTATTATGTTCGAAGTCTTGCTGCAAGCAATCCGATCCTGACT
GCAAGAGAAAGCCTAATGGTCCTCTTCGATGAGATCCGGAGGAGACTGGAGTATGTGAAG
AGAAGAAAAGATGAAGATTCAAACGCGAAAGAGATGGCTAACCTAAAACTGGCTGCTAAG
AAAGACGCGGGGCAGAAGAACAAATCCGATTCTCCGACACGTCGATGGGAGGAAGTTTGG
ATTCTTCCCGGATCCGTGCAGGAGGAAGTTGTTCCTGCAAGTAAACTGGAACAAGAAACC
CCAGACTTCGATGAATTGAAACTACCGCCACAAGATGTCGCCAAACATTTCGTTCTTCTT
TTTCTCAACGCTCACGGGAAATTGTTCACGAGAATTGGTCTTGAAACATTTTCTGAAATC
TTGACGAAGACTCTTCGACTCTTTGCTGCCACCCTGGAAGTTCCCAAAATTATGACATCA
CAGAGAATGCTGCAGTTGTACGCAATAAATCTTTTCTCTGTTTATAATGCAGAGAGATTA
TCGGTGCATGGAAGTGTCCAGGATTCAACACAGAATCTTCATCAAGCTCTTCGTCTCACT
TTCTCCGTATTTGCAGTAACAATAGAACAAATCAACAAGTTCTTTGAACTCAATTCTGAA
GATTCTGATCTGTTTCTGTCTGAGCATTTATGCATGCTTCTGCCAGCTGTTAAAATTATG
TTCGATTGGATGTATGCCAATAAAGACTTTTGGTATCCTCCTGCGAAGGATCTTACCGAA
CATGGAATTGATCTTTGGAAGAATCTCGCTAAGCTCTGCAACTGGATCTGTAACCATGAA
TCCACGAAACACAGCACTAGGATCTTTAGTACGGCTGATCCTGAACTGCAGGAAGTTTTT
CTACCAGAGGACGCGTTGCTTGCTGGATTTTCACCACTAGGTCAAGCATTCAGTGACCCG
CGATACGTGAGCTTAGACAAAGCACTTACAGAATCTGAGACAAAGTCGTACGTCAGGCAA
TGTGTTCGAATTAATCTAATCAAAGAATTTCTGGAATATTTATGTGGAATGGAAGAACCT
TTGCTGGCTTTTAAGCAAGGTGTATATGTTCCTGTTTCAACACACAGCTTGAACAACTGG
TCGGACAGACTGCACCAAGATGATGATTTTGATCCGAGCGATTACGATTTCGAAGATTAT
TCAAACTTGGCTGTCGGAAATTCCTTCTCCGAGCAGACTTCATCGATCGATCATGACAAG
GAAGAATTAAAAGAGTTGATGAAGTACAGAGATTCTTTGCAAATGACAAAGAACCTCCAG
GAAAAGCGGCACAGCGAAATCCAGTCGTCTCTGGACCGTGACGAAAAAGTAAAGCTTGAA
ATTTGTCCGAAAAACCTCGTCCCAGACACGAACTGCTTCATTGACCATTTGAACCTCATA
AAAAGGATCATCAGAAGCGAGAAATACAAAATATGTATGCCACTAGTGGTCATCAGTGAG
CTGGAAGGTCTCGCGACAGAAAAGAAAGGAAGTTCAGATCACGCCAAGAACGTACACCAC
AATGCGAAATCTGCGATTGAGTTCATTAAAGTCTGTTTTGCATCAAACAATTCAAGGTTT
TGTGCTCTCACAAAACGAGGAACGGAACTGAATTCGTTGCAGTTTCGCAGCGAGGATACT
CATCTCGTTGGCAGCAATGACGATTTCATTTTACAAAGCGCGCAAGGTCACTCTACGACC
TTGTCTTCGAAGACGGATCGTGTCAGTGAGGGTATGCGGATAGTTCGCCGTTCTGTCGTT
CTGCTGACGGATGATCGTAACCTTCGCTTGAAAGCTTTGCTACTGCGAGACGTTCCTACT
AAAGGAATAGTAGAGTTTTGCAAATGGGCGAAAATATAA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[415-654] 4.0E-56 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[440-657] 2.37E-73 - T[727-994] 2.37E-73 |
| Pfam |
EST1 (IPR019458) - T[475-582] 1.7E-18 |
| Pfam |
DNA/RNA-bd_Est1-type (IPR018834) - T[590-936] 1.0E-56 |
| SUPERFAMILY |
PIN-like_dom_sf (IPR029060) - T[1083-1148] 1.14E-10 - T[1180-1246] 1.14E-10 |
| SMART |
PIN_dom (IPR002716) - T[1084-1230] 2.8E-10 |
| Pfam |
PIN_dom (IPR002716) - T[1086-1234] 2.9E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMG7_HUMAN | 33 % | 105 | 7.33E-23 |
| EST1A_HUMAN | 38.977 % | 520 | 5.89E-162 |