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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C9.407.v1....' > 
  2. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S207.g03306.01.t

Possible name(s)

TRMT5

Gene model

Haaura.CG.MTP2014.S207.g03306

Location

S207 [8,182 / 10,736]

Sequences

Amino acid sequence

Length: 457

>Haaura.CG.MTP2014.S207.g03306.01.p
MNSSIAKTYSLLKAIKFFVKNFKMQKPVEAPVINAVFIAPSEVKGMVNLNREAFTKQVTL
PALYIPQSSLAAFNKTFKTQILKTRGAKFPHQSKSEGEEMGMYRALKQDFDFTNLTQKQT
EALETLRIKPVIERKTLCITYEHYKHREILNAILPEGLDVTSGFERVGHIIHVNLREHQI
PYKNIIGQVLLDKHVGLKTVVNKTSIIDSTYRNFEMEVIAGEEDFVTKVVEYGFTFHFDF
SKVFWNSRLLTEHHEISCDIPKLSHVFDVFAGVGPFAIPLARKGCHVHANDLNTHSYKWL
LHNTKVNKAQVTAYNMDGRQFIKETLGNHLRSTDEKTGPSYVIMNLPALSIEFLDAFKGL
LDNTEETATDQSPEVHVFCYTFSSAEDAIADIQERVKEHMRESLPENHKITEIRKVSTGK
FMYRISFVVPTNVFTTYAKEIEQPKAKKAKTEDLSI*

Nucleotide sequence

Length: 1,371

>Haaura.CG.MTP2014.S207.g03306.01.t
ATGAACTCCAGTATAGCTAAAACTTATTCGCTGTTGAAAGCTATCAAATTCTTTGTCAAA
AATTTTAAAATGCAAAAACCTGTGGAGGCACCGGTTATCAATGCAGTATTTATTGCTCCC
TCTGAAGTAAAAGGGATGGTAAATCTGAACAGAGAAGCATTTACAAAACAAGTGACCCTA
CCAGCACTGTATATTCCACAATCATCACTGGCTGCATTCAACAAAACTTTCAAAACCCAA
ATACTGAAAACAAGGGGTGCAAAATTTCCCCATCAGTCGAAAAGTGAAGGGGAGGAGATG
GGAATGTACAGGGCTTTGAAACAAGACTTTGATTTTACAAACCTCACTCAGAAACAGACG
GAGGCACTGGAAACACTTCGCATAAAACCGGTTATCGAAAGAAAAACCTTATGCATAACT
TATGAGCATTACAAACACAGAGAGATACTCAATGCCATACTGCCTGAAGGATTAGATGTT
ACATCAGGATTTGAACGAGTTGGTCATATAATTCATGTCAATTTGAGGGAACATCAAATC
CCTTACAAGAATATTATAGGACAGGTTTTACTGGACAAGCATGTGGGACTGAAGACAGTT
GTCAACAAAACCTCCATAATAGACAGCACTTACAGAAACTTTGAAATGGAAGTCATAGCT
GGTGAAGAAGATTTTGTTACAAAAGTAGTTGAATATGGTTTTACTTTCCACTTTGATTTT
TCAAAGGTTTTTTGGAATTCTCGGCTTCTCACAGAACACCATGAAATCAGCTGCGATATA
CCAAAATTATCTCATGTATTTGATGTCTTTGCCGGAGTTGGCCCATTTGCAATACCGCTA
GCACGGAAAGGGTGTCACGTTCACGCAAATGATCTGAATACGCATTCCTACAAATGGTTA
CTTCATAATACGAAAGTAAATAAAGCACAAGTAACAGCATACAACATGGATGGACGACAG
TTTATCAAAGAAACTTTAGGAAACCACCTCAGATCAACGGATGAGAAAACCGGACCGAGT
TATGTAATTATGAATCTACCAGCTTTATCCATTGAATTCTTGGATGCTTTCAAAGGACTG
CTCGATAACACTGAAGAAACCGCAACTGACCAATCACCAGAAGTACATGTTTTTTGCTAT
ACATTCTCGTCTGCAGAAGACGCCATAGCTGATATTCAAGAACGTGTGAAGGAACACATG
AGGGAATCACTGCCAGAAAATCACAAAATTACAGAAATCAGGAAAGTCTCTACAGGCAAG
TTCATGTACCGCATATCATTTGTGGTTCCGACAAACGTTTTTACTACTTATGCGAAAGAA
ATCGAACAGCCAAAGGCAAAGAAAGCAAAAACAGAAGACCTTTCGATATGA

InterProScan

Hamap
tRNA_Gua_MeTrfase_euk (IPR025792) - T[46-445] 23.553
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[160-430] 5.83E-52
Pfam
MeTrfase_TRM5/TYW2 (IPR030382) - T[163-380] 2.8E-55
ProSiteProfiles
MeTrfase_TRM5/TYW2 (IPR030382) - T[164-431] 92.367

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM5_HUMAN 41.121 % 329 3.46E-108