- Transcript 'KH2012:KH.L19.3.v2.A...' >
- Transcript 'KH2012:KH.C4.420.v1....' >
- Clone 'cien114300' >
- Transcript 'KH2012:KH.C3.899.v1....' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S201.g03236.01.t
Possible name(s)
CRHR1; CRHR2
Gene model
Location
S201 [39,348 / 47,291]
Amino acid sequence
Length: 623
>Haaura.CG.MTP2014.S201.g03236.01.p
MRRDGICTIFVLVVLKISVDSTTATATSILSQNFTELPSNSLILDEQSHKVRILASSLHP
VISRHNIKSADEEKLENLCELTRNELTNYTNQQRINFAIKRARTIEVACNWMYTCELLLP
QDGFCPVLVDGLGTCFFPTGLGETATSSCPPFVAGIPYDSIKNVSRTCQGDGTWVTKSNY
SECKPILDNGIVCDGLKDYFGTGENKLPDDKVDPPCKSHFHNLALIAYVGRGLSLCTLAV
AFVLFWMLRSIRCWRNIIHWNLTASLILRNVFWIFLHSFIHHESRMKNTISCRILVTIFN
YTQATNYFWMFVEGLYLHMMVVLAYTHDRIKLRVYLAIGWGASIPLTLIWIVLKMQFENH
TCWMHDATESKMADYFIQIPIIIMLFANAIILANIVRILVTKLKTGYTTRETKRETVKFK
KAVKAALFLFPLLGVNYVVFFVSPSPDPPGQIIFLYFNTCMQSFQGFFVCTIYCFANSEI
QKAFRKKMNVFIYENSCLCCFCKKSPDLNRRLSSVSLSRTTITFLSLKTRDSTISRQHSC
ARSPIITPRIRSPLVVNRSGGGGIMTSAITTGRRATDRYPKELPVRVCNYQTPGWSAKFT
NDEDGRKKIEESMPLVSVEINRE
Nucleotide sequence
Length: 1,869
>Haaura.CG.MTP2014.S201.g03236.01.t
ATGAGGAGAGATGGAATATGTACTATTTTTGTGCTTGTAGTGCTAAAGATTTCTGTGGAT
TCCACAACAGCAACAGCAACATCAATTCTTAGCCAAAACTTCACTGAACTTCCGAGCAAT
TCATTGATATTGGATGAACAGAGCCACAAAGTGAGGATTCTAGCTTCTTCTCTACATCCT
GTTATCAGTAGACATAATATCAAATCGGCTGATGAAGAAAAATTGGAAAATCTATGCGAA
TTAACAAGAAATGAACTGACGAACTATACGAACCAACAAAGGATCAATTTTGCAATAAAA
CGTGCGAGAACGATTGAAGTTGCTTGTAATTGGATGTACACTTGTGAGCTACTGCTTCCG
CAAGATGGTTTTTGTCCGGTTCTCGTTGACGGTCTGGGTACGTGTTTTTTTCCGACTGGC
CTTGGTGAAACGGCGACTAGCAGTTGTCCACCATTTGTCGCAGGAATCCCGTACGACTCT
ATAAAAAACGTGTCACGAACTTGCCAGGGAGATGGAACTTGGGTTACCAAATCCAATTAC
AGTGAATGTAAACCAATCCTTGATAATGGTATTGTTTGCGATGGACTGAAAGACTACTTT
GGAACCGGTGAAAATAAACTCCCAGACGACAAAGTGGATCCACCTTGCAAATCTCATTTC
CACAACCTGGCTCTCATTGCATATGTGGGCAGAGGTCTATCTCTCTGTACTTTGGCGGTG
GCATTTGTGCTATTCTGGATGCTAAGGAGCATCCGTTGCTGGCGAAATATTATACACTGG
AATTTGACCGCATCTTTGATTCTGAGGAACGTATTTTGGATCTTTTTGCATTCCTTCATA
CACCATGAATCCAGAATGAAAAATACGATTTCATGCCGCATTTTGGTCACAATATTTAAT
TATACGCAAGCAACCAATTATTTTTGGATGTTCGTCGAAGGATTATATCTCCACATGATG
GTGGTGCTCGCTTATACTCACGACAGAATCAAACTGCGCGTTTACTTGGCAATAGGATGG
GGAGCCTCCATTCCACTAACCCTGATCTGGATTGTGTTAAAAATGCAGTTCGAAAACCAC
ACTTGTTGGATGCACGATGCGACCGAATCTAAAATGGCTGACTATTTCATTCAGATTCCC
ATTATCATAATGTTATTCGCCAACGCCATAATCCTAGCTAACATTGTCCGAATATTAGTA
ACGAAGCTGAAAACCGGATACACAACACGCGAGACAAAGAGAGAAACTGTTAAATTCAAA
AAAGCAGTCAAAGCGGCACTCTTTCTCTTCCCTTTACTTGGAGTGAATTACGTGGTATTC
TTCGTGAGTCCCAGTCCAGATCCTCCCGGCCAAATAATCTTCCTGTATTTCAACACGTGC
ATGCAATCCTTTCAGGGATTTTTCGTTTGTACGATTTACTGCTTTGCAAACAGTGAGATA
CAGAAAGCTTTCCGGAAGAAAATGAACGTATTTATATATGAGAACAGTTGCCTGTGTTGT
TTTTGCAAGAAGAGCCCGGATCTAAACCGCCGCCTCTCAAGTGTGTCATTGAGCCGCACA
ACCATCACATTCCTATCGTTGAAGACTCGGGATAGCACTATTTCGCGACAACATTCCTGC
GCTAGGTCGCCCATCATAACACCAAGAATTCGTTCACCTTTGGTAGTGAATCGCTCCGGA
GGTGGAGGAATAATGACATCTGCTATAACGACCGGCAGGAGAGCTACAGATCGCTACCCG
AAAGAACTACCGGTTCGAGTTTGCAACTATCAGACACCAGGATGGTCTGCCAAGTTTACA
AATGACGAGGACGGTAGAAAAAAGATAGAAGAGAGCATGCCTTTAGTGTCTGTAGAAATC
AACAGAGAG
| Gene3D |
GPCR_2_extracell_dom_sf (IPR036445) - T[83-193] 1.6E-17 |
| SUPERFAMILY |
GPCR_2_extracell_dom_sf (IPR036445) - T[108-189] 3.92E-17 |
| ProSiteProfiles |
GPCR_2_extracellular_dom (IPR001879) - T[108-187] 12.824 |
| SMART |
GPCR_2_extracellular_dom (IPR001879) - T[121-192] 4.8E-10 |
| Pfam |
GPCR_2_extracellular_dom (IPR001879) - T[124-184] 2.2E-11 |
| ProSitePatterns |
GPCR_2_secretin-like_CS (IPR017983) - T[125-150] . - T[465-480] . |
| PRINTS |
GPCR_2_CRF_rcpt (IPR003051) - T[150-167] 2.7E-14 - T[171-187] 2.7E-14 - T[319-331] 2.7E-14 - T[440-461] 2.7E-14 |
| Pfam |
GPCR_2_secretin-like (IPR000832) - T[221-469] 5.5E-64 |
| ProSiteProfiles |
GPCR_2-like (IPR017981) - T[223-477] 38.441 |
| PRINTS |
GPCR_2_secretin-like (IPR000832) - T[225-249] 1.0E-53 - T[257-281] 1.0E-53 - T[294-317] 1.0E-53 - T[332-357] 1.0E-53 - T[375-400] 1.0E-53 - T[422-442] 1.0E-53 - T[455-476] 1.0E-53 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTH1R_HUMAN | 29.351 % | 172 | 1.59E-46 |
| CRFR1_HUMAN | 37.563 % | 281 | 1.55E-88 |
| CRFR2_HUMAN | 40.148 % | 306 | 2.92E-98 |