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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1.g00056.02.t

Possible name(s)

CNOT2; CNOT3

Location

S1 [371,943 / 374,912]

Sequences

Amino acid sequence

Length: 522

>Haaura.CG.MTP2014.S1.g00056.02.p
MFSSGLGGAQKKSNMMLGQTQSSHFSSPLYGQQNKHDSNVIGSLGQFGRSYSIPGSLTPT
SLGGDLLNQQSQSRGILPMSRNSMGQPPNSSSQIGNSLLSGRPGMSPTRGISPSDMLSLK
QPMRQSGFNSTISRNQSFLSNQSMGMNAIGSESLSQFRQHQHQLGPNGSSGVLDISEFPV
LKGGTAMSSGITNGISNPFNLDQAEFPALAQRTRPIGSQPSNSLDSKPPYVGMLNKQNDN
AEFQIDNDEFPALPGGANATAAMNVMKAVFPEQDGRGDESNHKFGPLGNLQALGEDKSNV
TGMSMNQYSNQQKGIQVLQDNSIKSIPTSMLTDQYGVVGLLAFIKAAETDPTLVHLALGN
DLTTLGLNLNSPENLYHKFQSPFSRQPCRPQDIDFFVPSEYLTNAHIRDKLAPIKLNRYG
EDLLFYVYYTNPGDVLQLAAAAELYNRDWRYHKEERVWITRAPGIEPRMKSTAYEQGTYY
YFDCQNWRKVAKEFHLEYDKLEERPHLPNLMSLHFNPAQHA*

Nucleotide sequence

Length: 1,566

>Haaura.CG.MTP2014.S1.g00056.02.t
ATGTTTAGCTCTGGTCTTGGAGGTGCTCAAAAGAAATCGAACATGATGTTGGGTCAGACA
CAGTCTTCACATTTTTCATCTCCTTTGTATGGACAACAAAACAAGCATGATTCTAATGTC
ATCGGAAGCCTAGGACAGTTTGGCAGGAGTTACTCAATACCAGGAAGTTTAACACCGACG
AGTTTAGGAGGGGATTTGTTGAACCAGCAGTCCCAGAGCAGGGGAATTCTACCTATGTCT
AGGAACTCAATGGGTCAACCCCCTAATTCATCATCTCAAATCGGGAACAGTTTATTATCA
GGAAGGCCGGGGATGAGTCCAACGAGAGGGATTTCTCCTTCCGACATGCTCAGTCTGAAG
CAACCGATGAGACAGTCGGGTTTTAATTCAACTATTTCAAGGAATCAATCATTTCTAAGT
AATCAGTCAATGGGAATGAATGCGATAGGGAGTGAAAGTCTATCGCAGTTTCGACAACAT
CAGCATCAATTGGGTCCCAACGGTTCATCAGGTGTACTAGACATCAGCGAGTTCCCGGTT
CTAAAAGGAGGTACGGCAATGTCAAGTGGAATTACTAATGGAATATCGAATCCTTTTAAT
CTTGATCAAGCTGAATTTCCAGCACTGGCTCAAAGGACGAGACCTATCGGCTCACAGCCG
TCCAATTCGTTGGATTCGAAACCACCCTATGTCGGAATGCTGAACAAACAAAATGATAAT
GCAGAGTTTCAGATAGACAATGATGAATTCCCAGCACTACCTGGTGGCGCTAATGCGACA
GCTGCAATGAATGTCATGAAAGCAGTGTTTCCCGAACAAGATGGCAGAGGCGATGAATCA
AATCATAAATTTGGTCCATTGGGAAATTTGCAGGCGCTGGGCGAAGATAAATCAAATGTT
ACCGGCATGTCCATGAACCAATACTCGAACCAACAAAAAGGCATTCAAGTTTTACAAGAC
AACTCAATAAAAAGTATCCCAACAAGTATGCTAACTGATCAGTATGGTGTTGTCGGTTTG
CTAGCATTCATCAAAGCTGCGGAAACAGACCCAACATTGGTTCATCTTGCCCTCGGCAAT
GACCTCACGACCCTAGGACTAAATCTCAACTCCCCTGAAAACTTGTACCATAAATTTCAA
TCACCGTTTTCAAGACAACCATGTAGACCCCAAGATATCGATTTCTTTGTACCGAGTGAA
TATTTGACGAATGCGCACATCCGAGATAAACTTGCCCCAATCAAGCTAAACCGTTACGGA
GAAGACTTACTTTTTTACGTTTACTACACGAACCCAGGAGATGTCCTTCAACTAGCAGCC
GCAGCAGAACTGTACAATCGTGACTGGAGATATCACAAAGAAGAAAGGGTTTGGATAACG
AGGGCACCAGGAATTGAGCCAAGGATGAAAAGCACGGCGTACGAACAAGGAACATACTAT
TATTTTGATTGCCAGAACTGGAGAAAAGTTGCCAAGGAATTTCATCTTGAATACGATAAA
TTAGAAGAGAGACCACATCTACCCAACCTTATGTCATTGCACTTTAATCCGGCGCAGCAC
GCGTGA

InterProScan

Gene3D
CCR4-NOT_su2/3/5_N_sf (IPR038635) - T[325-521] 7.7E-81
Pfam
NOT (IPR007282) - T[378-501] 1.3E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNOT2_HUMAN 49.162 % 405 2.34E-136