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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1.g00054.01.t

Possible name(s)

LAMA2; MED30

Location

S1 [362,783 / 363,317]

Sequences

Amino acid sequence

Length: 178

>Haaura.CG.MTP2014.S1.g00054.01.p
MANQIPGPGEGVMPAQQQQSDISIAHVCQMGQDFVQDIVQKASEVFINLKVMQLPNGTQP
SLKNTQDRANKIRDSLSQIDFLFRNLKVLHKECQKKLPDDIDPLILVPYQNTRLEVDESS
TIELPMQKSSKEQMLEMKKAELESILRSKNQQLAVLVEQMRNLVWEINSVISLEDCV*

Nucleotide sequence

Length: 534

>Haaura.CG.MTP2014.S1.g00054.01.t
ATGGCTAATCAAATACCAGGACCGGGGGAAGGTGTAATGCCGGCGCAGCAGCAGCAATCT
GATATCAGCATAGCTCATGTGTGCCAGATGGGGCAAGATTTCGTTCAAGATATTGTACAG
AAAGCGAGCGAAGTTTTTATCAATCTAAAAGTAATGCAGCTTCCGAACGGAACTCAACCG
AGCTTGAAGAATACTCAGGATCGTGCAAACAAGATCCGCGATAGTTTGAGTCAAATCGAT
TTCCTTTTTAGAAACCTAAAAGTCCTTCACAAAGAATGCCAAAAGAAACTGCCAGACGAC
ATAGACCCACTAATATTGGTCCCATATCAGAACACGAGATTAGAAGTAGATGAATCATCG
ACCATCGAGCTCCCAATGCAAAAAAGCAGCAAAGAGCAGATGCTCGAAATGAAGAAGGCA
GAACTGGAATCGATATTGCGTTCAAAAAATCAACAGTTGGCGGTTCTTGTCGAACAGATG
AGAAATTTGGTTTGGGAAATAAACTCTGTTATATCTTTGGAAGATTGTGTTTGA

InterProScan

PANTHER
Mediator_Med30_met (IPR021019) - T[5-173] 7.9E-39
Pfam
Mediator_Med30_met (IPR021019) - T[24-171] 1.5E-33

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MED30_HUMAN 36 % 105 5.13E-29