- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1.g00042.01.t
Possible name(s)
CUBN; MFRP; PAMR1
Gene model
Location
S1 [309,901 / 312,582]
Amino acid sequence
Length: 261
>Haaura.CG.MTP2014.S1.g00042.01.p
MGEAIGLFSCPKQPWNKKCPQCCEQGWLACECPGTGILTGYPVPCCRENTVCTPCVDYPG
CNVFSNCKTCHINTRRTYLSYSEQKVMFCTSCNQGWSGGDCRKCGGVLKEKLGFIELDKY
PNEAECIWTIDATRNSIIELRFERFDLESDSRCTYDYLNLYDGAFIPEAKIESYCGNDVP
PRYISRTHVVALYFKAWFDSDSDETSTYGGFRISYRELNACARRPCFNGGACMLTTSVEY
VCVCTIGFSGSSCELSNIFI*
Nucleotide sequence
Length: 884
>Haaura.CG.MTP2014.S1.g00042.01.t
ATGGGTGAAGCTATTGGCTTATTCTCTTGCCCCAAGCAGCCGTGGAACAAGAAATGCCCA
CAATGCTGTGAACAAGGATGGCTGGCTTGCGAATGTCCAGGCACTGGGATTTTAACAGGA
TATCCTGTTCCATGTTGCAGGGAAAACACTGTCTGTACACCATGTGTGGATTATCCTGGA
TGCAATGTCTTCAGTAACTGTAAAACTTGTCACATCAATACAAGGCGCACTTATCTTTCT
TACTCGGAACAAAAAGTTATGTTCTGCACTTCCTGTAACCAAGGATGGTCAGGTGGAGAC
TGCAGAAAATGTGGAGGTGTTTTGAAAGAAAAACTTGGATTCATAGAGTTGGACAAATAT
CCAAATGAAGCTGAATGCATATGGACTATTGATGCAACAAGAAACTCCATCATTGAATTA
AGATTTGAAAGGTTTGACCTAGAATCAGACAGCCGATGTACTTATGATTATCTTAACTTA
TATGATGGCGCCTTTATCCCAGAAGCAAAAATTGAAAGTTACTGTGGGAATGATGTTCCA
CCCAGATACATTTCGAGGACACACGTTGTAGCGCTTTATTTCAAGGCATGGTTTGATTCT
GACTCAGACGAAACATCGACTTACGGGGGATTCCGAATATCTTACAGGGAATTGAACGCT
TGCGCACGGCGACCTTGTTTTAACGGAGGTGCTTGCATGTTAACCACGTCTGTAGAATAC
GTTTGCGTGTGCACTATTGGATTCAGTGGATCTTCATGCGAACTTAGTAATATTTTCATT
TGACTGTCTCTAATTACTGTAATTCATTTATTGCGCCACCGGTAAAACATGTGACACAGG
CCGGCATGCCACCGACAGTAAAAATCAGTTACCTTATGACATCA
| SMART |
EGF-like_dom (IPR000742) - T[54-102] 130.0 - T[220-254] 1.3E-4 |
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[103-216] 1.1E-24 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[104-217] 7.72E-25 |
| SMART |
CUB_dom (IPR000859) - T[104-218] 9.2E-17 |
| CDD |
CUB_dom (IPR000859) - T[104-216] 2.36786E-26 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[104-218] 22.051 |
| Pfam |
CUB_dom (IPR000859) - T[104-215] 4.8E-20 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[217-254] 18.083 |
| Pfam |
EGF-like_dom (IPR000742) - T[221-251] 5.0E-6 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[242-253] . - T[242-253] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAMR1_HUMAN | 38.462 % | 179 | 6.36E-52 |
