- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1.g00037.01.t
Possible name(s)
CACHD1; CACNA2D3; CACNA2D4
Gene model
Location
S1 [288,385 / 295,263]
Amino acid sequence
Length: 1,126
>Haaura.CG.MTP2014.S1.g00037.01.p
NVEHYFIHLAPGVDDNTLLDPIATDREMFRKRYIIIWLFLLNVNASEVKWNEGAVVDVNL
LSESFDELMDVVVGHKQLQNYYDTLNFKQKTLNGTKLIRSVADNFGMKFFDRNNAVRRMK
YIVQESLSVQSHFQECCHVDPGSMESDSRFKQGIGNEACHRISDLTDKEKALYLTKKFQE
ECSKNLANMASLRWQYFGSETGITTQYPSVKVGECGNYDCRFRPFYVQASVPEAKDIIII
IDKSGSMATLHSGTTLMDTAKEAAKTVVRTLNPQDRFAVIAFSSEIILPDERYNMKPCFS
KQLSRATTQNTNDITYFIDDIKHNGATIYSKALESAFDYFDNSDLDDNREKVILFLSDGE
PTDNNKTEIFSILKTRNERLNNSVILLTYGLGEKQKFQILKDLAEQNVDSYGIPKGKLHE
KIKPGIFTRVKTPENLRQEMASYYRYFSRPQTTKEEPIWSLPYLDMWGIGFLMSVTLAVH
NDQGHVIGVVGTDLTIDDLLTGATYLRLSDLSYMFIIDSTGLVIFHPLFQYSEDNEVRFV
DIMAFEREPNMKPVIEDMKKGGSGYSEFKSKRILSDGNSRLYGVRSVVVDSQVYWTQIPH
TKFAVCLVMAKDSKESTLQELDPEDGASFLYHRFDIKSPENTCQHFQNLCTINQSSVSLG
PRAFTNTEHYLNEQETIDDIMAIENYMVTGKGGGSLKRGVRNSVWATYQAETVWKFSNNT
EIEKYILWRYMGTKEGVFRIYPGVELHKKFDPIHRTWYQRAVSNNGDTAFTTVYKDTVTA
REVISLSKVIYEGRRSRKHNRLTDEVIAVVGVDVTWAYLEHVLKSLYPMCFDDLYSCLLI
DTAGFVIYRHTGTTRKGSYPTHITQAEPLIAQSLIEKGKMIHETCINMEYVTEQRTYKIT
EQEIFMGTTECFNYQLVKVQRTNIFILVRQVIHGSCEGGPSSCLCSSFLTKIRKCVTDGY
GCECPCTAEYTDYNTCQNKFYFTGKKKDLKPCSPESNRGDGETNPVNKEDLRKLPLCFEH
SETTEKPSVEDYHQSASGGVAGGVIGGILLVIFLVVLIHFIIRRIHKAKETSKQQRDDVF
PRQSITQVQIITNITRNLYHLHHFRLRFQSTLKISILTPVHHFEV*
Nucleotide sequence
Length: 3,414
>Haaura.CG.MTP2014.S1.g00037.01.t
AATGTCGAACATTACTTCATTCACCTAGCACCGGGTGTGGATGACAACACCTTATTAGAT
CCTATTGCGACAGACAGGGAAATGTTTCGAAAAAGATATATCATAATTTGGTTATTCTTA
CTAAACGTTAATGCTTCGGAGGTAAAATGGAATGAAGGCGCAGTCGTTGATGTGAATTTA
CTGAGCGAAAGTTTTGACGAACTCATGGACGTGGTTGTTGGACATAAACAATTGCAAAAT
TATTACGACACCTTGAATTTCAAACAGAAGACTCTGAATGGAACCAAACTGATACGTTCT
GTCGCAGATAACTTCGGAATGAAATTTTTCGATCGCAACAATGCTGTAAGGAGAATGAAA
TACATTGTTCAGGAATCTCTATCGGTGCAAAGTCATTTTCAAGAATGTTGTCATGTCGAC
CCTGGCAGCATGGAATCAGACAGTAGATTCAAGCAAGGGATCGGGAACGAAGCCTGTCAT
AGAATCTCAGACCTAACCGACAAAGAAAAGGCATTGTATCTAACGAAAAAGTTCCAAGAG
GAGTGCAGCAAAAATTTGGCTAATATGGCATCACTCAGGTGGCAATACTTTGGCAGTGAA
ACTGGAATAACGACGCAATATCCCTCCGTCAAAGTCGGGGAATGCGGAAATTATGACTGC
AGATTTCGACCATTTTACGTTCAAGCGAGTGTTCCAGAAGCGAAAGACATCATCATTATT
ATAGATAAGAGCGGATCAATGGCCACTCTACATAGCGGTACGACGCTGATGGATACGGCC
AAAGAGGCGGCAAAAACCGTTGTTAGAACACTTAATCCACAGGACAGATTCGCTGTAATC
GCATTCTCAAGTGAAATCATTTTACCGGACGAAAGATACAATATGAAACCTTGCTTTTCG
AAGCAGTTATCTCGTGCAACAACACAGAACACAAACGACATTACTTATTTCATTGACGAT
ATCAAGCACAATGGTGCTACAATCTACTCAAAGGCACTCGAATCGGCATTTGATTATTTT
GATAATTCGGATCTAGACGACAATCGAGAGAAAGTGATATTGTTTTTATCGGACGGAGAG
CCGACAGACAACAACAAAACGGAAATCTTCAGTATACTGAAAACAAGAAACGAACGACTC
AATAATTCGGTCATATTGCTTACATATGGACTTGGAGAAAAACAAAAATTCCAGATTTTA
AAAGACCTGGCTGAGCAAAACGTAGATTCGTACGGCATACCGAAAGGAAAACTTCACGAG
AAAATTAAGCCTGGTATATTTACGAGAGTCAAAACACCAGAAAATCTTCGACAAGAAATG
GCTTCTTACTACAGATATTTTTCTAGGCCACAAACAACTAAGGAAGAACCTATTTGGTCG
CTACCTTATCTGGACATGTGGGGTATTGGATTTCTTATGAGCGTAACATTAGCAGTACAT
AACGACCAGGGTCATGTCATCGGCGTAGTCGGAACAGATTTGACAATAGACGATTTGCTC
ACAGGAGCGACTTATCTTCGACTATCGGATTTGTCATACATGTTTATAATCGACTCAACG
GGTCTCGTCATTTTCCATCCTTTATTTCAATATTCTGAAGACAACGAAGTTAGGTTTGTC
GATATAATGGCCTTCGAAAGAGAACCTAACATGAAGCCTGTAATTGAAGATATGAAAAAA
GGTGGCTCTGGATATTCAGAATTCAAATCGAAAAGGATTTTATCAGACGGAAATAGTAGG
CTTTATGGAGTGAGGAGTGTTGTAGTGGATTCTCAGGTTTACTGGACACAGATACCTCAC
ACAAAATTCGCTGTATGTCTCGTCATGGCCAAGGACAGTAAAGAGTCGACGTTGCAAGAA
CTTGATCCTGAGGATGGAGCATCCTTCCTATATCACAGATTTGATATCAAGTCACCAGAA
AACACTTGCCAGCACTTCCAAAATCTCTGCACGATAAATCAGTCATCAGTATCACTTGGA
CCGAGAGCTTTCACAAACACAGAACATTATTTGAACGAACAAGAGACAATAGATGACATC
ATGGCTATTGAAAATTATATGGTAACTGGAAAAGGTGGTGGCTCACTTAAGAGAGGTGTA
CGAAATTCAGTTTGGGCAACATATCAAGCAGAAACGGTATGGAAATTTTCCAACAACACA
GAAATAGAGAAATATATACTATGGAGATATATGGGGACCAAAGAAGGAGTATTTCGTATC
TACCCTGGTGTTGAATTGCACAAGAAATTTGATCCAATACACAGAACATGGTACCAGAGA
GCAGTATCTAATAATGGCGACACCGCTTTCACAACCGTGTATAAAGATACAGTAACGGCA
AGAGAAGTCATTTCCTTATCGAAGGTCATATATGAAGGAAGACGATCAAGAAAACATAAT
AGACTCACAGACGAAGTGATAGCAGTGGTCGGAGTAGATGTGACTTGGGCGTATTTAGAG
CATGTCTTGAAAAGTCTTTATCCAATGTGCTTCGACGATCTGTACAGTTGCCTGCTGATT
GATACTGCTGGCTTTGTGATTTACCGTCACACAGGAACAACGAGAAAAGGATCATATCCG
ACTCACATAACACAAGCCGAACCACTCATAGCACAGTCTTTGATAGAAAAAGGCAAGATG
ATACATGAGACCTGTATTAACATGGAATATGTGACAGAACAGAGGACATATAAAATTACA
GAGCAAGAAATATTTATGGGAACCACAGAATGTTTCAATTACCAACTTGTTAAAGTCCAG
AGGACAAATATATTCATTCTAGTTCGCCAAGTTATCCACGGATCATGTGAGGGAGGACCC
TCTAGCTGTTTATGTTCAAGTTTCCTGACAAAAATTCGAAAATGTGTTACCGACGGGTAC
GGTTGTGAATGTCCATGCACAGCGGAATACACAGACTACAACACCTGCCAAAACAAGTTT
TATTTTACTGGAAAAAAGAAAGACTTGAAACCCTGCTCACCTGAAAGCAATCGAGGGGAT
GGGGAAACCAATCCAGTTAACAAGGAAGATTTGAGGAAGCTACCGCTATGTTTTGAGCAT
TCAGAAACAACAGAAAAACCGTCTGTCGAAGATTATCATCAGTCTGCATCTGGTGGTGTA
GCAGGAGGTGTTATTGGTGGCATATTGCTTGTGATCTTTCTTGTTGTACTGATCCACTTT
ATAATCAGGCGGATCCATAAAGCAAAGGAAACTTCTAAACAACAGAGGGATGATGTATTT
CCAAGACAATCAATTACCCAGGTTCAAATTATTACCAACATTACTAGGAACCTTTACCAC
CTCCACCACTTCCGCCTACGTTTCCAATCGACACTGAAGATCAGTATATTAACGCCAGTG
CACCATTTTGAGGTATGACTTCGACAACAAGTGGACATCCGGAGAACAGATTTT
| Gene3D |
vWFA_dom_sf (IPR036465) - T[234-441] 6.1E-30 |
| SMART |
VWF_A (IPR002035) - T[234-423] 2.6E-14 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[235-411] 2.64E-23 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[236-430] 19.375 |
| Pfam |
VWF_A (IPR002035) - T[237-360] 2.4E-13 |
| Pfam |
dCache_1 (IPR033479) - T[301-540] 2.3E-12 |
| SUPERFAMILY |
Sensor-like_sf (IPR029151) - T[719-821] 5.57E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CAHD1_HUMAN | 25.434 % | 336 | 2.86E-97 |
| CA2D1_HUMAN | 23.25 % | 106 | 4.63E-23 |
| CA2D3_HUMAN | 22.852 % | 127 | 1.91E-29 |
