- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1.g00024.01.t
Possible name(s)
NPAS1; NPAS3; SIM2
Gene model
Location
S1 [160,581 / 165,551]
Amino acid sequence
Length: 945
>Haaura.CG.MTP2014.S1.g00024.01.p
QKPNDVHSNMVKCEREVNNIEMDANSEKDSQQDDEKGSTSDEVSNSASTPPYRTNDSNSG
YDRSRNDRLLNIRKVKSREAARTRRGKENYEFYELAKLLPIPAETSSQLDKASIIRLTKS
YLKMREFAYHGNPPWNMLVEGPPPNRTVKDTSASRNKSFLSAAVKKTFEEELGTHLLQSL
DGFLFVLTCQGKFIYISETVSVYLGLSQVEMIGSSIFDYTHPADHNDLILHLGMTLSSQS
KPSNEKSIADCKKHIGFFIRMKSALTRRGVNLKSSSYKVIHITSQVRLPHLKRGCVKKSV
SSSDKSETDSETGEATASSTSPLGLCGIGSALPPPTLNDIRLEKPMFVTRLNPAFKFTFC
EAMVQDLLGFEVKEIVGNSFYHMIHAGDVNKLKYCHSDILNKGQTMTPYYRWLCKSGGYI
WMQSCVTVLTNQRLYPDQSFVWINYVISQPMDKTQILDVLQLSPEEMQLRLDSLRSKAEA
SKQNGKTSAKSKALASKKAATVNSNGVKQVAKRPSRIHKKLLTKAVSNSVQCESSVIQES
RGEAGTSVEVRPLCLVEEGEKDEHSCQETDENNNCAQTKTKNKSNCETANTVIRCNSKCS
MNKCESPVCISASDIDKSNLSETTVGEHLRISHNCAEMENPTSSRGELQKKKLCRKRHHK
QTTPAKYKERRKISNTPLTTPKIDVECTQSSTVKENQEDSQKKQKMQSSPDSITSLHPFV
SLDSNSTCKNVSDSSDTTYRNEKVSAVSTSVSETKLAEATVPMTDYLDTDSVIWLNPPNK
EISNHSDLPPGIKQMHSLWGVRRPPSAVHHHYPFGINPTLLHSNPLLAKMLMASWGGYHH
LPSSDTYVMTTPIQFVQQVRNPHMKCPPGLPSAAFISQATAQTPASVSAILEELKKDPLH
KVGPPNKVVVQGMQDSSGKSTLISGSKHLLHSTTSDSQQSTRKKS
Nucleotide sequence
Length: 2,835
>Haaura.CG.MTP2014.S1.g00024.01.t
CAGAAACCAAACGACGTTCACAGTAACATGGTTAAGTGCGAACGTGAAGTAAATAATATA
GAAATGGATGCAAATTCAGAAAAAGATTCACAGCAGGATGACGAGAAAGGCTCAACTTCG
GACGAAGTGTCGAACTCCGCTTCCACGCCGCCCTACAGAACAAACGATAGCAATTCTGGA
TATGACAGATCGAGAAATGATAGATTGCTCAACATCAGAAAGGTGAAATCAAGAGAGGCA
GCAAGAACCCGACGGGGCAAAGAAAACTATGAATTTTATGAACTTGCTAAACTCTTGCCA
ATTCCTGCTGAGACCTCAAGCCAGCTGGACAAGGCGTCGATCATTCGTCTGACGAAGAGT
TACTTGAAAATGAGAGAATTTGCATATCATGGCAATCCACCATGGAACATGTTAGTCGAA
GGGCCCCCGCCTAACAGAACTGTTAAAGACACTTCTGCTTCAAGAAATAAGTCATTTCTC
TCTGCTGCTGTGAAAAAAACATTTGAAGAAGAATTAGGAACTCATTTACTTCAGAGTCTT
GATGGCTTCCTTTTCGTCCTAACTTGCCAAGGAAAATTCATATACATTTCTGAAACGGTT
TCTGTCTATTTAGGATTATCTCAAGTTGAAATGATAGGCAGCAGTATTTTCGACTACACT
CATCCAGCCGACCATAACGACTTGATACTACACCTAGGGATGACGCTATCTTCCCAAAGT
AAACCGAGCAATGAAAAGTCAATTGCAGATTGCAAAAAGCACATAGGCTTTTTCATACGG
ATGAAATCAGCATTGACAAGGCGAGGAGTAAATTTGAAGTCGTCAAGCTACAAAGTTATT
CACATCACCTCGCAAGTTCGCCTACCTCACCTGAAACGTGGTTGTGTTAAAAAGAGCGTG
TCTTCATCAGACAAGAGCGAAACCGATTCAGAAACTGGAGAAGCCACTGCAAGTTCAACC
TCTCCTCTAGGCCTTTGTGGCATTGGAAGCGCCCTGCCTCCTCCGACATTAAATGATATC
CGCCTCGAAAAACCCATGTTCGTGACAAGATTGAATCCCGCATTTAAATTCACATTTTGC
GAGGCTATGGTCCAAGATTTGCTTGGTTTTGAAGTGAAGGAGATTGTAGGAAACAGCTTC
TATCACATGATACATGCTGGAGATGTGAATAAATTAAAATATTGCCATTCAGACATTCTG
AACAAGGGACAGACCATGACTCCATACTACAGATGGCTGTGCAAATCGGGCGGTTATATC
TGGATGCAGTCATGTGTGACAGTACTGACCAATCAGCGACTGTATCCAGATCAGTCATTT
GTTTGGATAAACTATGTGATAAGCCAACCAATGGATAAAACCCAAATTCTAGATGTCCTG
CAACTGTCCCCTGAAGAAATGCAATTGAGATTAGATTCTCTACGCTCAAAAGCAGAAGCA
AGCAAACAAAATGGTAAGACTTCTGCAAAGTCAAAAGCACTTGCTTCCAAAAAGGCGGCC
ACGGTTAACTCAAATGGCGTAAAGCAAGTAGCCAAGCGTCCATCACGTATACACAAGAAG
TTACTGACGAAAGCGGTAAGTAACAGTGTGCAATGTGAGTCATCTGTCATCCAGGAATCT
AGAGGTGAGGCCGGTACGTCCGTTGAAGTCAGGCCATTGTGTCTCGTGGAGGAGGGCGAG
AAGGATGAACACAGCTGCCAGGAAACAGATGAAAATAACAACTGTGCACAAACAAAAACT
AAAAATAAAAGCAATTGTGAAACCGCCAACACTGTTATTCGCTGTAATTCAAAATGTAGC
ATGAACAAATGTGAAAGTCCTGTTTGTATATCTGCTAGTGATATTGATAAAAGTAACCTA
TCTGAGACTACTGTTGGTGAACATTTGAGAATATCTCATAACTGTGCTGAAATGGAAAAT
CCTACCTCATCCAGAGGGGAGTTACAGAAAAAGAAATTGTGTCGTAAGAGGCACCACAAG
CAGACAACTCCTGCGAAGTACAAGGAAAGGCGAAAAATTTCTAACACGCCTCTGACAACT
CCTAAAATTGATGTAGAATGCACACAGAGCAGTACTGTCAAAGAAAACCAGGAAGATAGC
CAGAAAAAGCAGAAGATGCAATCTTCTCCAGATAGCATCACATCACTTCACCCCTTTGTA
TCTTTGGATTCCAATTCCACTTGTAAAAATGTCTCTGATTCATCTGACACTACTTACAGA
AATGAGAAAGTAAGTGCCGTCAGTACATCTGTTTCCGAAACTAAGTTGGCAGAAGCGACA
GTTCCGATGACCGATTACTTAGACACAGATTCAGTCATTTGGTTGAACCCACCTAACAAA
GAAATTTCAAACCATAGCGATTTACCTCCTGGCATTAAACAGATGCACAGCTTGTGGGGT
GTTCGACGTCCACCGTCTGCTGTGCACCACCATTATCCCTTCGGCATCAATCCGACTTTG
CTGCATTCTAATCCGCTCTTGGCTAAAATGCTGATGGCAAGCTGGGGTGGCTACCATCAT
CTTCCATCTAGCGACACTTACGTGATGACAACTCCGATACAATTTGTACAGCAGGTAAGG
AATCCCCATATGAAATGTCCGCCAGGATTACCATCTGCCGCATTCATATCCCAAGCGACA
GCGCAAACACCCGCTTCTGTGTCCGCCATCTTAGAGGAGCTCAAAAAAGATCCTTTGCAT
AAAGTGGGACCTCCGAATAAAGTCGTTGTACAGGGGATGCAGGATTCCAGTGGCAAGTCG
ACCCTAATATCTGGTAGCAAGCACCTTCTACATTCTACCACCAGTGACTCTCAACAATCG
ACCAGAAAGAAATCA
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[65-125] 4.7E-6 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[72-125] 13.573 |
| CDD |
bHLH_dom (IPR011598) - T[73-126] 3.93877E-10 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[73-128] 1.7E-7 |
| SMART |
bHLH_dom (IPR011598) - T[78-131] 4.5E-6 |
| ProSiteProfiles |
PAS (IPR000014) - T[169-239] 16.542 - T[345-403] 9.878 |
| SMART |
PAS (IPR000014) - T[171-237] 8.0E-10 - T[335-401] 1.2E-4 |
| Pfam |
PAS_fold (IPR013767) - T[175-227] 1.6E-6 |
| CDD |
PAS (IPR000014) - T[180-228] 3.79783E-9 - T[345-438] 1.14394E-12 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[180-226] 9.27E-13 - T[345-447] 1.45E-17 |
| Pfam |
PAS_fold_3 (IPR013655) - T[358-430] 7.9E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SIM2_HUMAN | 38.983 % | 266 | 1.59E-77 |
| NPAS3_HUMAN | 47.907 % | 397 | 2.29E-123 |
| NPAS1_HUMAN | 40.58 % | 327 | 7.86E-101 |
