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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.348.v3....' > 
  2. Region 'REG00001287' > 
  3. Transcript 'KH2012:KH.C1.1048.v1...' > 
  4. Region 'REG00000040' > 
  5. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1.g00021.02.t

Possible name(s)

RHOA; RHOB; RHOC

Gene model

Haaura.CG.MTP2014.S1.g00021

Location

S1 [149,428 / 150,217]

Sequences

Amino acid sequence

Length: 194

>Haaura.CG.MTP2014.S1.g00021.02.p
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKTVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRGDEGTIKELSKMKQEPVKQEEGRAMAEKIGAFGYLECSSKTKEGVREVFENATRAALQ
TRKHKKKGGCDVL*

Nucleotide sequence

Length: 582

>Haaura.CG.MTP2014.S1.g00021.02.t
ATGGCAGCGATCCGTAAAAAACTTGTCATCGTCGGTGATGGTGCTTGCGGTAAAACTTGC
TTGTTGATCGTCTTCAGCAAAGACCAATTCCCAGAAGTTTATGTACCTACTGTGTTTGAA
AACTATGTTGCAGATATCGAAGTAGATGGAAAAACGGTTGAACTAGCCTTGTGGGACACT
GCTGGGCAGGAAGACTATGATAGATTGCGACCACTGTCTTATCCTGACACAGATGTCATT
CTGATGTGTTTTTCAATCGACAGCCCAGATTCCTTGGAAAACATTCCTGAAAAATGGACA
CCGGAGGTGAAACACTTTTGTCCAAACGTTCCCATTATTCTTGTCGGAAACAAAAAAGAT
CTCCGAGGAGACGAAGGCACTATAAAAGAACTTTCTAAGATGAAACAAGAACCGGTTAAA
CAGGAGGAGGGTCGTGCTATGGCTGAGAAAATTGGAGCTTTTGGATACCTGGAATGCTCT
TCAAAAACAAAGGAAGGAGTCCGTGAAGTTTTCGAAAACGCGACTCGAGCCGCACTTCAA
ACTAGAAAGCATAAGAAAAAGGGAGGATGTGATGTTCTTTAA

InterProScan

ProSiteProfiles
Small_GTPase_Rho (IPR003578) - T[1-178] 28.351
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[5-159] 4.5E-46
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[6-179] 5.89E-59
Pfam
Small_GTPase (IPR001806) - T[7-179] 1.5E-57

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RHOA_HUMAN 90.155 % 359 1.13E-128
RHOB_HUMAN 83.684 % 333 2.72E-118
RHOC_HUMAN 88.083 % 356 1.27E-127