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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA52YJ20'
  2. Clone 'AHC0AAA68YJ06'
  3. Clone 'AHC0AAA73YC07'
  4. Transcript 'Phfumi.CG.MTP2014.S1...'
  5. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1.g00019.01.t

Possible name(s)

E2F2; E2F3

Location

S1 [140,834 / 143,344]

Sequences

Amino acid sequence

Length: 453

>Haaura.CG.MTP2014.S1.g00019.01.p
NSERGNVIMQSPEPRVFSATNARKNLIINLESLNPNSWNDSTSSSFSDNSLMIELSSDNS
NDKFEIKSRTRMFHQEHQPIYPNQPYPSCTETSFKTPLKHSYRNARHSKKWQATTPGKSP
SEKTRYDTSLGLLTKRFVELMHESADGVLDLNYAAEQLAVQKRRIYDITNVLEGIKLIEK
RSKNNVQWVNPTQGMGLNSPNEKTIHKFREEIQYLRKIEDEITQLINHRQVELEHLSESN
SQHSYVTYQDIRGITSFKDQIVICIKAPQDTKLEVPDPGEKIQILLKSTRGEIDVFLCPD
PLDVANPEEASSPSSIESLEDDLLSPDSETCTGISKENLSSPLMRSHRYQSPLVADQNIS
HTLKEGQCLLQQTEDQLESTSEQDSGIVDSSGTSFLIPLSPALDETAYLFGLDDSEPISD
LFDIATSDSASSSSNSTLYMPSIFFSIDSDHL*

Nucleotide sequence

Length: 1,597

>Haaura.CG.MTP2014.S1.g00019.01.t
AATTCGGAACGTGGGAACGTCATAATGCAGTCGCCTGAACCACGAGTTTTTTCAGCCACC
AACGCAAGAAAGAATCTTATAATTAACTTGGAATCACTGAATCCAAACAGCTGGAATGAC
AGTACGTCATCATCGTTTTCAGACAATTCGCTGATGATAGAGCTATCAAGCGACAACTCG
AATGATAAATTTGAAATAAAATCCAGAACACGAATGTTTCATCAGGAACATCAGCCTATA
TATCCAAACCAGCCATATCCCAGTTGTACAGAAACATCTTTCAAAACTCCACTCAAGCAT
TCATATAGAAATGCACGTCACTCAAAGAAATGGCAGGCCACTACTCCGGGAAAATCACCT
TCAGAGAAGACCCGTTACGATACATCTTTAGGACTTTTAACAAAGAGATTCGTCGAACTT
ATGCATGAGAGCGCTGATGGAGTTTTAGATTTAAATTATGCTGCAGAACAACTCGCCGTT
CAGAAACGACGGATATACGACATCACAAATGTTTTGGAGGGAATTAAACTCATTGAAAAA
CGGTCTAAAAATAACGTTCAGTGGGTTAATCCAACACAAGGAATGGGCCTGAATTCACCA
AACGAAAAAACAATTCACAAATTCAGAGAAGAGATACAATATCTACGTAAAATTGAAGAC
GAAATCACACAGTTAATAAACCACCGACAAGTTGAGCTGGAACATCTGTCAGAATCGAAT
TCACAGCATTCATATGTAACTTATCAAGACATTCGAGGCATAACTAGCTTCAAGGATCAA
ATTGTTATTTGCATCAAGGCACCACAAGACACTAAATTGGAAGTGCCAGACCCTGGAGAG
AAAATCCAAATACTCCTCAAAAGTACCAGGGGAGAAATCGATGTGTTTTTATGTCCCGAT
CCATTAGATGTTGCTAACCCTGAAGAAGCCAGTTCTCCTTCGTCTATAGAGAGCCTAGAA
GACGATCTCCTTTCTCCAGATTCCGAAACTTGTACAGGGATATCCAAGGAGAATTTGTCA
TCTCCCTTGATGCGTTCCCATCGATATCAATCCCCATTGGTCGCTGACCAGAACATTTCA
CACACATTGAAGGAAGGTCAGTGCCTCCTGCAGCAAACAGAAGACCAACTGGAAAGCACA
AGCGAACAGGACTCTGGCATCGTTGATTCGTCTGGCACGTCCTTTTTGATACCTCTTTCC
CCAGCTCTAGATGAAACCGCTTATCTGTTTGGACTAGATGACAGCGAACCAATCAGTGAC
CTTTTTGACATAGCCACAAGTGATAGTGCTTCGTCATCCTCGAACAGCACCTTGTACATG
CCCAGCATATTTTTCAGCATTGATTCTGACCATTTATGACACCCGAGATTTATTGCCAAT
CATAGCAACAACAGATTACTGCCTTTCTCATTGTTGATTTTTATCTTCACTGATCAACAA
TTATCGTGCCATCCGATGCCTTGACAGCCACCTCTTCCCATCGCACTCTTTATACACTGC
CACTGCAATTTCTAAATCAAATGTGATCATTATCTCTAAACTGTCATTTTATCACTTACC
GTGTGGAAAATTTGTTGATTGTGCGGTGATAGCATTA

InterProScan

PANTHER
E2F (IPR015633) - T[115-424] 2.2E-89
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[119-191] 8.3E-28
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[125-189] 3.63E-17
SMART
E2F_WHTH_DNA-bd_dom (IPR003316) - T[125-190] 1.3E-32
Pfam
E2F_WHTH_DNA-bd_dom (IPR003316) - T[127-189] 4.3E-24
SUPERFAMILY
E2F-DP_heterodim (IPR037241) - T[206-300] 3.66E-27
CDD
E2F_CC-MB (IPR032198) - T[207-300] 5.47392E-38
Pfam
E2F_CC-MB (IPR032198) - T[209-299] 3.3E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
E2F3_HUMAN 43.605 % 211 3.35E-63
E2F2_HUMAN 45.141 % 229 1.17E-70
E2F1_HUMAN 37.534 % 187 2.75E-54