Aniseed - Transcript Card

Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S19.g00565.01.t

Possible name(s)

DHRS13; RDH11; RDH12

Gene model

Haaura.CG.MTP2014.S19.g00565

Location

S19 [86,138 / 89,129]

Sequences

Amino acid sequence

Length: 298

>Haaura.CG.MTP2014.S19.g00565.01.p
MTVISINNTGDTMYMLFLGSLALWLYLFVVVQRRKLKCLCDVKMTGKTVLITGASDGLGK
ETALDLAARGARIIMTCRDSRKGHKVKHEIEKKTGNDEIILKYLDLADLGSVRKFTKELY
NDEDKLDVLINNAGIGTGTGFSKDGFPLLFATNQLGPFLLTMSLLDLLRKSTSPRVVFVA
SIGHHWGKIDFDTLEEPDDEFVTSQFRAYTQSKLASVLTARELHKREHKNGLNVFALQPG
TVFTGIFRDFPALLKAITFPLFYLFLKTADEGCQTHIHCSLCPGLEKLSGKYFAECRY

Nucleotide sequence

Length: 894

>Haaura.CG.MTP2014.S19.g00565.01.t
ATGACAGTGATCTCGATCAACAATACCGGCGACACCATGTACATGTTATTTCTCGGAAGT
CTAGCCTTATGGCTATATCTTTTCGTTGTTGTACAAAGAAGAAAACTGAAATGCTTATGC
GATGTCAAAATGACTGGAAAGACTGTGTTGATAACAGGAGCTAGCGATGGACTAGGAAAA
GAAACAGCCTTAGACCTGGCCGCGAGAGGCGCAAGAATCATTATGACTTGCAGAGATTCT
CGGAAAGGTCATAAGGTCAAACACGAGATTGAGAAAAAGACTGGCAATGATGAAATCATT
CTCAAGTACCTCGATTTAGCGGATCTCGGATCAGTTAGAAAATTCACCAAGGAATTATAT
AACGATGAAGATAAATTGGATGTTCTCATTAACAATGCGGGAATCGGGACAGGGACCGGC
TTCTCGAAAGATGGTTTCCCTCTTCTATTTGCCACAAACCAGCTAGGACCATTTCTACTA
ACCATGTCGTTATTGGACTTGCTCCGAAAGAGCACCAGCCCCAGGGTGGTTTTCGTCGCC
TCAATTGGGCATCATTGGGGCAAGATCGATTTTGACACCTTGGAGGAACCTGACGACGAA
TTCGTTACATCACAGTTCCGAGCGTACACTCAAAGCAAGTTGGCCAGTGTGCTAACAGCG
AGGGAACTTCATAAAAGGGAACATAAAAACGGACTCAATGTATTCGCATTACAACCAGGA
ACTGTTTTTACCGGCATTTTCCGAGATTTCCCTGCGTTGCTAAAAGCAATAACGTTTCCA
CTCTTTTACCTGTTTCTGAAAACGGCGGACGAGGGGTGTCAAACACATATACATTGCAGC
TTATGCCCTGGCTTGGAAAAACTGAGCGGGAAATACTTTGCTGAATGCAGGTAT

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[44-294] 4.16E-50
Pfam	SDR_fam (IPR002347) - T[47-182] 2.6E-25
PRINTS	SDR_fam (IPR002347) - T[48-65] 4.2E-13 - T[124-135] 4.2E-13 - T[168-184] 4.2E-13 - T[230-247] 4.2E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	42.146 %	193	7.69E-60
DHR13_HUMAN	41.961 %	198	2.49E-61
RDH12_HUMAN	45.038 %	199	4.32E-62