- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S196.g03192.01.t
Possible name(s)
PRICKLE1; PRICKLE2; PRICKLE3
Gene model
Location
S196 [18,559 / 30,195]
Amino acid sequence
Length: 910
>Haaura.CG.MTP2014.S196.g03192.01.p
MFQHRFILFNPFLFPLPDSRKSCAHCKCGLEYHVGDRSLAKMELHQPNKSRRAHNEVGVS
SAVNQQMTLISDDDSGCSLDEYAWVPPGLTPEQVQKYFSYLTEDQVPYVDSAGEKYRIRQ
LLQQLPPHDNEVRYCNELSKEEKKELKLFSEQRKHDALGRGAARTFPNNINPAICENCGN
RINGGDVGVFSSRAGHAVCWHPNCFVCSVCHELLVDLIYFYQDGQLYCGRHHAETLKPRC
SACDEIIFADECTEAEGRHWHMNHFCCYECDIVLGGQRYIMRDEKPYCTRCFESCYAEYC
DTCGELIGLDAGQMQYEGQHWHATETCFACVRCRRSLLGHPFLPKHGQIFCSKACSVGED
QTHTESDSQYEIPQIPTSHNVRHSLNLENLSLHDTTWEDSEIIRNSPVLRKIDQHAEVYL
NAEELYPSHILNSQCNKSQHATTSRGRDLYAKNCGSLAKCASSSGAKPSEDKTTNGFTKP
VVTPNGGGGGFLQNTYNSTDSSGYNSSSTIDAIDHARNHLPPGGKLHSSDTLNSNSSNVS
KGTTGSMVSTDRGCSMGGHIPASEFVPWKINSSETGVRKTGTEVQKTIEALRKAQNAAAD
SSNCVWQKRRPSREQKIDHVKPIGADDAPQSKIERVTLDQCQKSSFKIIPIPHMSTNVSP
NHPKEKPPIPAPRAKYPSMMPTRSDLPRVPPQKPMMAHPLIDNLPLVADKSPRHVIVNKV
SPVHIQNKDSNCRSSNSDDSSYRDYITSTEHGRSSLPDIAKHAEPKGILKKGRRGTIQCD
SDLLSNDSGSNNIETDPYEDSVTIEKKFAATVDEIHAQSDDGHENFVRGTRPYNSAKYLE
SSKPSFKPRLRFLKSFHWHHIEMFNLISLLKISSLLTHFSLFEFRLSVFILSSNSTLRFL
DSMLSASRC*
Nucleotide sequence
Length: 2,814
>Haaura.CG.MTP2014.S196.g03192.01.t
AGTAACCTGATTAATCCAACTCCGGGAAAGTATTCATCAGCAGTCCTGGGGTATTTCTGT
CGCTAGAGAAGCTCAGTCTTTTTGATGTTTCAGCATCGCTTCATTTTATTCAACCCGTTT
CTGTTTCCGTTGCCGGATTCTAGAAAATCCTGTGCGCACTGCAAGTGCGGTCTCGAATAC
CACGTTGGCGACAGATCTCTTGCCAAAATGGAACTTCACCAGCCGAACAAAAGCAGAAGA
GCTCACAACGAAGTCGGTGTTTCTTCTGCTGTAAACCAACAAATGACACTTATATCAGAT
GACGATAGCGGTTGTTCGTTAGACGAATACGCCTGGGTACCACCAGGACTTACGCCAGAA
CAGGTCCAAAAGTACTTCTCCTACTTAACTGAAGACCAGGTGCCATACGTCGATAGCGCC
GGTGAGAAGTATCGCATAAGACAACTGCTGCAACAGCTTCCCCCTCATGACAACGAGGTA
AGATACTGCAATGAGCTCAGCAAAGAGGAAAAGAAAGAATTGAAGTTATTCAGCGAACAA
CGAAAGCACGACGCATTGGGGAGGGGAGCTGCTCGCACGTTCCCAAACAATATAAATCCA
GCAATCTGTGAAAACTGTGGAAATCGTATAAACGGTGGTGACGTCGGAGTTTTTTCGAGT
AGAGCTGGTCACGCGGTGTGCTGGCACCCTAACTGTTTCGTGTGCTCTGTGTGTCATGAA
CTCTTGGTCGACCTAATTTATTTTTATCAGGACGGTCAACTTTATTGCGGACGACATCAC
GCTGAAACGTTGAAGCCGCGGTGCTCTGCCTGCGACGAGATTATCTTCGCCGACGAGTGC
ACGGAAGCAGAAGGAAGGCACTGGCATATGAATCACTTTTGCTGCTACGAATGCGACATT
GTCTTAGGCGGACAGCGGTACATTATGCGAGACGAAAAACCATACTGCACACGTTGTTTC
GAGTCTTGCTATGCGGAATACTGTGATACTTGCGGGGAATTGATTGGTTTGGACGCAGGT
CAAATGCAGTACGAAGGTCAGCACTGGCATGCCACGGAAACGTGTTTCGCATGTGTACGA
TGTCGCCGTTCCCTGCTGGGACATCCATTCCTCCCTAAGCACGGTCAGATCTTTTGTTCA
AAGGCTTGCAGCGTTGGAGAAGACCAAACTCACACCGAATCTGATTCCCAGTACGAAATT
CCCCAGATCCCCACCTCCCACAATGTACGGCACAGTCTCAATCTCGAGAACCTTTCTCTC
CACGATACGACTTGGGAAGATTCCGAAATCATCCGGAATTCGCCGGTACTTCGTAAGATT
GATCAGCATGCGGAAGTCTATCTGAACGCAGAAGAACTATACCCGTCACACATACTTAAC
AGTCAATGCAACAAAAGTCAACACGCCACCACCAGCAGGGGCCGCGACCTTTACGCGAAG
AACTGCGGTTCTTTAGCCAAATGCGCGTCGTCGAGCGGCGCGAAACCTTCCGAAGACAAA
ACTACCAACGGGTTTACGAAACCGGTCGTAACACCCAATGGCGGCGGAGGAGGGTTTTTA
CAAAATACGTACAACAGTACGGATAGCAGCGGCTACAACAGCAGCAGTACCATCGACGCC
ATAGATCATGCTAGAAATCATCTACCTCCGGGCGGCAAATTACATTCGTCCGACACCCTC
AACAGTAATAGTAGTAACGTTAGTAAAGGGACCACGGGAAGCATGGTCAGTACAGATAGA
GGTTGTTCGATGGGTGGTCACATACCTGCATCCGAATTCGTTCCCTGGAAGATAAACTCT
TCCGAAACCGGCGTAAGGAAAACTGGAACAGAGGTGCAAAAAACGATAGAGGCTCTGAGA
AAAGCCCAAAATGCCGCTGCAGACAGTAGTAATTGCGTTTGGCAGAAAAGACGGCCCTCT
CGGGAGCAGAAAATCGACCATGTTAAACCCATCGGGGCAGATGACGCACCTCAGTCTAAA
ATTGAACGAGTGACCTTGGACCAATGTCAAAAATCTTCGTTCAAGATTATTCCCATTCCT
CACATGTCGACAAATGTTTCCCCCAACCATCCCAAAGAGAAACCACCCATTCCAGCACCG
CGAGCCAAGTATCCCTCGATGATGCCGACGAGGTCGGACTTGCCGCGTGTACCGCCTCAA
AAACCGATGATGGCTCATCCTTTAATTGATAATTTGCCACTGGTGGCAGACAAGAGCCCT
CGTCACGTGATTGTGAACAAAGTGTCACCCGTTCATATTCAGAACAAGGATTCGAACTGC
AGGTCATCGAATTCAGACGACTCTTCGTATAGAGATTATATTACAAGTACGGAACACGGC
AGATCCTCGTTACCCGACATTGCTAAACACGCAGAACCGAAGGGAATACTCAAAAAAGGT
CGCCGAGGAACTATTCAATGCGATTCTGACCTATTGAGCAACGACTCCGGTTCCAATAAT
ATAGAAACGGACCCTTATGAAGACAGCGTAACAATCGAGAAAAAGTTTGCTGCCACAGTG
GACGAAATACATGCGCAGTCAGACGATGGGCACGAAAATTTCGTTCGAGGCACACGTCCT
TACAACAGCGCCAAATACTTGGAATCGTCAAAACCCTCTTTCAAACCACGATTGCGATTT
CTCAAATCCTTTCATTGGCACCACATCGAGATGTTTAATCTCATTTCGTTGCTAAAGATC
AGTTCACTGCTTACGCACTTTTCTTTGTTTGAATTCCGATTAAGTGTATTTATCCTTTCG
AGTAATAGCACATTGCGATTTCTCGATTCGATGCTATCAGCATCTCGTTGTTAA
| ProSiteProfiles |
PET_domain (IPR010442) - T[63-171] 35.842 |
| CDD |
PET_prickle (IPR033723) - T[71-167] 4.11848E-62 |
| Pfam |
PET_domain (IPR010442) - T[81-162] 7.1E-35 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[173-237] 10.009 - T[238-298] 12.83 - T[299-362] 6.782 |
| SMART |
Znf_LIM (IPR001781) - T[174-231] 1.7E-8 - T[239-291] 5.1E-16 - T[299-354] 2.0E-7 |
| Pfam |
Znf_LIM (IPR001781) - T[175-234] 4.2E-10 - T[240-294] 2.4E-9 - T[300-353] 3.1E-5 |
| CDD |
LIM1_prickle (IPR033725) - T[175-233] 4.68164E-38 |
| CDD |
LIM2_prickle (IPR033726) - T[238-293] 1.82192E-37 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[240-274] . |
| CDD |
LIM3_prickle (IPR033727) - T[298-356] 9.08162E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 72.313 % | 508 | 5.07E-167 |
| PRIC1_HUMAN | 69.132 % | 483 | 8.77E-158 |
| PRIC3_HUMAN | 61.032 % | 447 | 8.94E-147 |
