Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1913.g09043.02.t

Possible name(s)

MYL4; MYL6; MYL6B

Gene model

Haaura.CG.MTP2014.S1913.g09043

Location

S1913 [16,322 / 17,096]

Sequences

Amino acid sequence

Length: 156

>Haaura.CG.MTP2014.S1913.g09043.02.p
QSDFSEQMIEDVKEAFELFDKTGDTKIFYNQAGDVMRALGECPTNEDLLKFMGNPSKEDM
NTKKLSHEEFLPIFDKIIKEFVKGTYEDFVEGLRVFDKDGNGTVMGAEIRHVLTTLGEKL
TSAQVSSMMQGQENSNGILNYEDFSKFLLEQPEKAL

Nucleotide sequence

Length: 468

>Haaura.CG.MTP2014.S1913.g09043.02.t
CAGTCCGACTTCAGTGAACAAATGATCGAAGATGTCAAAGAAGCTTTCGAGCTTTTCGAT
AAAACCGGTGACACCAAAATATTTTACAATCAAGCTGGTGATGTGATGAGAGCATTGGGA
GAATGTCCGACTAATGAAGATCTATTGAAGTTTATGGGAAATCCCAGCAAAGAAGATATG
AACACTAAAAAATTGTCCCACGAAGAATTCCTTCCAATCTTCGACAAAATCATCAAAGAA
TTCGTGAAAGGAACCTACGAAGATTTTGTTGAAGGTTTGAGAGTTTTTGATAAAGACGGT
AACGGTACAGTTATGGGAGCTGAAATTAGACACGTTCTTACAACCCTCGGTGAAAAACTT
ACATCAGCCCAAGTCAGCTCCATGATGCAAGGACAAGAAAATTCAAATGGAATTCTTAAC
TACGAAGATTTCAGCAAATTCTTGTTGGAACAACCAGAAAAAGCATTG

InterProScan

SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[4-148] 1.22E-31
ProSiteProfiles	EF_hand_dom (IPR002048) - T[7-42] 10.58 - T[84-119] 10.915 - T[134-154] 5.475
SMART	EF_hand_dom (IPR002048) - T[11-39] 1.9 - T[88-116] 3.0

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MYL6_HUMAN	58.784 %	186	1.03E-61
MYL6B_HUMAN	54.422 %	180	2.42E-58
MYL1_HUMAN	57.143 %	179	4.14E-58