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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'
  2. Transcript 'KH2012:KH.L9.23.v1.A...'
  3. Transcript 'Haaura.CG.MTP2014.S2...'
  4. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1846.g08963.04.t

Possible name(s)

Haaura.CG.MTP2014.S1846.g08963

Location

S1846 [187 / 14,283]

Sequences

Amino acid sequence

Length: 552

>Haaura.CG.MTP2014.S1846.g08963.04.p
ELFKNVEPTICMQGESKKFDLEYKISIFMNESKFQEALELLEQLQPMQNDKARKINTQLM
ISQCQIKIRMPHSSAMELEKLITSSPVQPDDLKETANNDVKQKKYVRAFLYYFSASKFYK
EKYLGDDAAQGIKACAQAVEMFVEEMIKQDDGKKIVTDYVIPALKEVTDDLSNIPNADPR
YQVRLQAWCLQSIGLCYKHCKDYQQFADNLESAIELLKRELKEDVVRYRVYGICLNSSGE
AHEKLDQKGKAMDLYERAIEAKNDANDWPSNQSEHGSKELSQEKLSXIVEFYEAKLGDSR
VLIKTSKFSEALDLLREIEPMLRDVEGKIKTQLIKIERYMMMEQHLKVARQLDELVRLML
SSKKAADDVMKMAADDIKAELYISGFLRYFSACKLYKEKSPGNGIKACLLAVQLFVENMI
CQDEKMEKIVTDYIIPALEEVTDDLSKIPNSNQEVQVEQQAWCLLYIALCYGYCQDCQRY
AEFNESAIELMKKQLKEDAEKYYMVGYCYNNASEAYSFLNQSEKSKEMLRKALDVYNEAT
DWPNEEKKKEEI

Nucleotide sequence

Length: 1,656

>Haaura.CG.MTP2014.S1846.g08963.04.t
GAATTATTCAAAAATGTCGAACCAACAATCTGCATGCAAGGAGAATCCAAGAAATTCGAC
TTGGAATACAAAATATCAATTTTCATGAATGAATCCAAGTTCCAGGAAGCTCTCGAACTT
CTTGAACAACTTCAACCGATGCAAAATGATAAAGCAAGGAAGATAAACACCCAACTTATG
ATATCGCAATGTCAGATAAAAATTAGGATGCCACACAGTAGCGCTATGGAGCTAGAAAAG
CTGATTACATCATCTCCAGTGCAACCAGACGACTTGAAGGAAACGGCAAACAACGATGTC
AAACAAAAGAAATATGTTCGAGCATTTCTTTACTATTTTTCGGCAAGTAAATTCTACAAA
GAAAAATATCTTGGTGATGATGCAGCGCAAGGTATCAAGGCATGTGCACAAGCTGTTGAG
ATGTTTGTGGAAGAAATGATCAAACAAGATGACGGGAAGAAGATCGTCACTGATTACGTC
ATCCCAGCACTGAAGGAAGTCACCGATGATCTGAGTAATATCCCGAATGCAGATCCAAGA
TATCAAGTCAGATTGCAAGCCTGGTGTTTACAAAGCATTGGATTATGCTACAAACATTGC
AAAGATTATCAACAATTTGCCGATAATCTTGAATCTGCCATCGAGCTCTTGAAGAGAGAA
TTAAAGGAAGATGTCGTTAGATATCGTGTGTATGGAATTTGTCTTAATAGCTCTGGTGAA
GCTCATGAGAAATTGGATCAAAAGGGGAAAGCAATGGATCTGTATGAAAGAGCTATCGAG
GCAAAGAACGATGCAAATGACTGGCCAAGTAATCAGAGTGAACATGGCAGTAAGGAGCTG
TCACAGGAAAAGCTGAGCNAAATAGTAGAATTTTATGAAGCCAAGTTAGGTGATTCGAGG
GTCTTAATAAAGACATCCAAGTTCTCTGAAGCTCTGGATCTTCTTCGTGAAATCGAACCG
ATGCTCAGAGATGTGGAAGGAAAAATAAAAACTCAGCTGATAAAGATAGAAAGGTATATG
ATGATGGAGCAACATCTTAAGGTGGCTAGACAGTTGGACGAACTTGTACGACTGATGCTT
TCATCGAAGAAAGCAGCCGATGATGTCATGAAAATGGCGGCAGATGACATCAAAGCGGAG
CTGTACATAAGTGGATTTCTTCGTTATTTTTCTGCATGCAAATTATACAAAGAGAAATCT
CCTGGGAATGGTATCAAAGCATGTCTGCTTGCTGTGCAACTGTTTGTGGAGAATATGATC
TGCCAGGATGAAAAGATGGAAAAGATTGTCACTGATTACATCATCCCAGCACTGGAGGAA
GTCACCGATGATCTGAGCAAAATCCCAAATTCAAATCAAGAAGTTCAAGTTGAGCAACAG
GCTTGGTGTTTGCTCTATATTGCATTGTGTTACGGCTACTGCCAAGATTGTCAACGATAT
GCCGAGTTTAATGAATCTGCAATTGAACTGATGAAGAAACAATTGAAAGAAGATGCTGAG
AAGTATTACATGGTTGGATATTGCTACAACAATGCTAGTGAAGCTTACTCATTCTTGAAT
CAGAGTGAGAAATCGAAAGAAATGTTGAGAAAAGCACTGGATGTTTACAACGAAGCAACT
GACTGGCCTAATGAGGAAAAAAAGAAGGAAGAAATC

InterProScan

SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[88-123] 2.19E-7 - T[171-261] 2.19E-7 - T[302-326] 1.14E-5 - T[450-538] 1.14E-5
SMART
TPR_repeat (IPR019734) - T[187-220] 62.0 - T[232-265] 11.0 - T[506-539] 100.0
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[435-551] 4.3E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value