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- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1813.g08919.01.t
Possible name(s)
ZNF41; ZNF557; ZNF568
Gene model
Location
S1813 [8,646 / 10,161]
Amino acid sequence
Length: 505
>Haaura.CG.MTP2014.S1813.g08919.01.p
MDKLNITQNLYKQFLIGKYCDLQINVENTTFHAHSCVVAAASWVLEAILQNSIAGDSKFL
HPVKPSLSIQLHGVTPYSVSSILNFIYTSTLDPEIFTDFNKQKEVLHAAKLYKIDEMLSQ
LSGKDADKVNLLVENNYEVMPLPSERLDERLFEKLLPAESEVVKRVMADQNEETSMTKII
ELSSTELDVGIGKKSELSLKEEQEFVSQCFKYSKEHGILYCILCCEICSDPTELVSHMLE
HKEGRRVSVRAAISNVNDDAVALSPSSSDDTIKTRSRKRRKLAPKKAFTCAECGVSYTTK
VYLIRHYNIRHPESCFCKFCGDVFQNTDDLQVHLRVHESELEEDESQNQQGLKLLNSRKG
KGKRVFTCNLCFANFGKKRELTAHLQSIHGIVKPMHVCTVCGKEFKEKASLRSHTRVHTG
EKPYMCSFCGKSFADQKTWKDHERRHRGEKPFLCTACGKSFTYRQSFTRHMKFHEGKRPF
QCSFCGKAFVLRQNLKEHEKRHNK*
Nucleotide sequence
Length: 1,515
>Haaura.CG.MTP2014.S1813.g08919.01.t
ATGGATAAGCTGAACATCACCCAGAATCTTTACAAACAGTTTTTGATCGGGAAATATTGT
GACCTTCAAATCAATGTCGAGAACACGACATTTCATGCCCACAGCTGTGTCGTGGCGGCA
GCTTCGTGGGTGCTCGAAGCCATACTCCAAAATTCAATCGCGGGAGACTCGAAATTTTTG
CATCCAGTCAAGCCAAGCCTTTCCATACAGTTACACGGCGTGACGCCGTACTCTGTGTCT
TCAATTTTGAACTTCATATACACAAGCACCCTAGATCCTGAAATTTTTACCGATTTCAAC
AAGCAAAAAGAGGTTTTACATGCAGCTAAACTTTATAAAATTGATGAAATGCTCAGTCAA
CTGTCTGGAAAAGACGCTGACAAAGTTAATCTTCTAGTTGAGAATAATTACGAGGTAATG
CCATTACCTTCAGAGAGATTGGACGAACGCTTGTTTGAGAAACTGCTGCCCGCCGAAAGT
GAAGTTGTAAAAAGAGTGATGGCCGATCAGAACGAAGAAACTTCCATGACGAAGATTATA
GAACTTTCTTCGACAGAATTGGACGTAGGAATCGGGAAGAAAAGTGAACTTTCTCTCAAG
GAAGAACAAGAATTCGTTTCACAATGTTTTAAATATTCAAAGGAACATGGAATATTGTAT
TGCATCCTTTGTTGTGAAATTTGCTCGGATCCAACAGAGCTTGTGTCTCATATGCTCGAA
CATAAAGAAGGAAGAAGAGTATCAGTGAGAGCAGCGATCTCGAACGTGAATGACGACGCG
GTCGCTCTGTCGCCCTCTAGCTCCGACGACACGATCAAAACAAGGTCAAGAAAACGTAGA
AAACTTGCTCCGAAAAAAGCGTTTACTTGCGCAGAATGTGGAGTTTCGTACACAACAAAA
GTTTACTTAATAAGACATTATAACATTCGTCACCCGGAAAGTTGTTTTTGCAAGTTCTGC
GGAGACGTTTTTCAAAACACAGACGACCTTCAGGTTCACCTCCGAGTTCACGAGTCGGAA
CTGGAAGAGGACGAGTCCCAGAATCAGCAGGGTTTGAAATTATTAAATTCTCGGAAGGGA
AAAGGGAAACGAGTTTTCACATGTAACTTGTGTTTCGCGAACTTTGGAAAGAAGAGAGAG
CTCACCGCACATCTGCAGAGCATTCACGGAATCGTGAAACCGATGCACGTCTGTACTGTC
TGTGGTAAGGAATTTAAAGAGAAGGCAAGTCTCAGATCTCACACAAGAGTACACACAGGC
GAGAAACCTTACATGTGTTCGTTTTGCGGGAAATCTTTCGCGGACCAGAAGACATGGAAA
GATCATGAGAGACGTCACAGAGGCGAGAAACCATTTCTTTGTACAGCATGCGGGAAAAGT
TTCACATACAGACAGTCGTTCACACGACATATGAAATTTCATGAAGGTAAACGTCCTTTC
CAGTGTTCGTTCTGTGGGAAGGCATTCGTCTTGAGACAGAATCTAAAAGAGCACGAGAAG
AGACATAATAAGTGA
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[5-118] 1.36E-15 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[12-120] 1.7E-16 |
| SMART |
BTB/POZ_dom (IPR000210) - T[20-129] 2.2E-10 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[20-95] 13.012 |
| SMART |
Znf_C2H2_type (IPR013087) - T[219-241] 2.7 - T[288-311] 0.043 - T[315-337] 0.034 - T[366-389] 0.28 - T[396-418] 8.3E-4 - T[424-446] 0.0023 - T[452-474] 0.0082 - T[480-502] 0.0011 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[286-337] 8.29E-8 - T[405-461] 3.92E-19 - T[446-498] 8.06E-17 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[288-311] 9.577 - T[315-342] 10.596 - T[366-394] 10.492 - T[396-423] 16.54 - T[424-451] 14.773 - T[452-479] 15.355 - T[480-504] 12.778 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[290-311] . - T[315-337] . - T[368-389] . - T[398-418] . - T[426-446] . - T[454-474] . - T[482-502] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZNF41_HUMAN | 40.625 % | 164 | 1.57E-43 |
| ZN568_HUMAN | 37.2 % | 161 | 5.83E-43 |
| ZN557_HUMAN | 36.726 % | 155 | 2.4E-42 |