- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1781.g08881.01.t
Possible name(s)
LRP5; LRP6
Gene model
Location
S1781 [880 / 16,312]
Amino acid sequence
Length: 1,059
>Haaura.CG.MTP2014.S1781.g08881.01.p
MCDFCHSLIWLISGYLAVTCLHSDAVASDRAQGRNPCGDNNGGCSHLCLISPDVPHYSCA
CPTGVLITADQKTCKDGPESILLLARRPDIRIISLDTPDFTDIVLPLQNVQMAVAIEYDP
VDDLVYWTNNVKKAIFRATLDGKKEERIISDELEQCDGIAIDWVARNLYWAEAGRNYIAV
SRLNGTSRKYLIEDGISEPRAIILDPAQGQFYWSDWGKYPKIERASLDGSDRQVFVNTSI
RWPNGLALDYENKLLYWAEAHLDKIEVIGLNGMGRRVLLKEKLPHIFGFSLLDGYLYWSD
WQKRKVERMLVNDTKSRHSMIDELSDLMGIKATSVNPFPATNPCGKNNGGCSHLCLYTPK
GARCNCPNGLELLSDMKNCIEPEAFLVFALSEEVRRISLETAPGGPIEIPFGDSVGVTNL
DVSVHDETIYWTDNVQMLIYKAFMNGTGMKSIIDPGVSVLEGIAVDWLGRNIYWADSLSN
RIEMARLDSNIRRPVLWQDLQQPRSIAVDPVNGYIYWTEWGGQPRIRRAQMDGSDVKTLL
GNGELGRAHSLTIDYADQRLYWVDLDGNEIVSSNMTGGDRKQITETNENHISRISLFNDF
IYWTRRSSIERANKTTGANRVIIQPSIDDPREDILDMLVYHTSRQSGVSACSFDNGGCEH
LCLAIPGGTHKCDCPAHYKLNKDNVTCTAPDNFILFHQERYISRIVLEHGITGAQSPDTV
LPIRGLVNVCAIDYDPVGDFLYWIDCSLGEIKRSRMNGTEVTTILGNKEHSLRYPYDLSI
EPYGRMLFWSDSSNNSINVMTLDGKVIGTVVSNSVMTGAQMTSVTVNPRKIAVHSKNGFL
FFSSVCTDATACRVKILRCTLDGSDCLVLFNKGLKKVSGITVDEDKLYWTDEELQKIHSS
NLDGSSHAPFVDSELGKPVGITIFGPNVYWFDQTADGGQIKSVRKSGKDPKIIQGMIRDL
KGIVGVTNIKKKELDNHPCTNNNGRCSHICIGNEDGTTRCSCPNHLTLEDFKCAPMSPHR
EDTMLPIYNAIAYNIYNGQILRLIKAWRDAQPNNEIIS*
Nucleotide sequence
Length: 5,235
>Haaura.CG.MTP2014.S1781.g08881.01.t
ATGTGCGACTTTTGTCATTCGCTGATTTGGCTAATCTCTGGCTACTTAGCTGTCACCTGT
CTACATTCCGATGCCGTTGCATCAGATCGTGCCCAAGGCCGCAATCCGTGTGGAGATAAC
AACGGTGGCTGCTCTCACCTATGCCTCATATCACCTGACGTTCCTCATTACAGCTGCGCT
TGCCCAACCGGTGTGTTGATTACTGCAGACCAGAAAACATGCAAAGACGGTCCCGAATCT
ATATTACTCCTCGCCCGTCGTCCCGACATTCGGATCATATCGCTGGACACGCCTGATTTC
ACAGACATTGTCTTGCCTCTGCAGAACGTGCAGATGGCCGTCGCCATTGAGTACGACCCT
GTCGACGACCTTGTGTATTGGACCAACAATGTTAAGAAAGCAATATTCAGAGCTACCTTG
GATGGAAAAAAAGAGGAAAGAATTATTTCTGATGAACTAGAGCAGTGTGACGGCATCGCC
ATCGACTGGGTGGCACGTAATTTATACTGGGCCGAGGCCGGACGCAATTACATCGCGGTT
TCCAGGCTGAACGGCACATCGAGAAAGTATCTGATTGAAGACGGAATTAGTGAACCAAGG
GCCATTATACTCGACCCAGCACAAGGCCAGTTCTACTGGAGCGATTGGGGAAAATATCCA
AAGATTGAAAGAGCATCGCTTGACGGTTCTGACAGACAAGTCTTCGTTAATACTTCCATC
AGATGGCCAAATGGTCTGGCCCTGGATTATGAAAATAAGTTGCTGTACTGGGCTGAAGCT
CATCTGGATAAAATCGAAGTTATTGGACTGAATGGCATGGGACGAAGGGTGCTTCTGAAA
GAAAAATTACCTCATATATTTGGTTTCAGTCTGCTCGATGGTTATTTGTATTGGTCCGAC
TGGCAAAAGCGCAAGGTAGAAAGAATGCTCGTGAACGATACAAAGTCACGGCACTCCATG
ATAGACGAGCTGTCAGATCTGATGGGGATAAAAGCTACCAGCGTCAATCCGTTCCCGGCA
ACCAACCCATGCGGTAAAAACAACGGAGGCTGCTCGCACCTTTGCTTGTATACTCCCAAG
GGTGCTAGATGCAACTGTCCGAACGGCCTCGAGCTCCTCTCCGACATGAAGAACTGCATC
GAGCCGGAAGCGTTCCTCGTGTTCGCGTTATCTGAGGAAGTTAGGAGGATCTCGCTCGAG
ACCGCTCCCGGTGGACCCATTGAAATCCCATTCGGAGACAGCGTCGGAGTTACGAACTTG
GATGTGTCTGTGCATGATGAAACGATCTACTGGACAGACAATGTTCAAATGCTTATATAC
AAGGCGTTCATGAACGGCACCGGCATGAAGAGTATCATCGACCCCGGGGTCAGCGTCCTC
GAAGGCATAGCCGTCGACTGGCTAGGTCGAAACATCTACTGGGCAGATTCTCTTTCCAAC
CGTATCGAAATGGCGAGACTCGATTCAAACATACGTCGTCCGGTACTCTGGCAAGACCTG
CAGCAGCCAAGAAGCATTGCGGTGGACCCAGTTAATGGATACATATACTGGACAGAGTGG
GGAGGCCAACCGCGCATCAGACGTGCCCAGATGGACGGTTCGGACGTTAAAACCTTGTTA
GGAAACGGGGAACTGGGCCGGGCGCACTCTCTCACTATCGACTACGCCGATCAGAGATTG
TACTGGGTGGATTTGGACGGCAACGAAATAGTTTCGTCCAACATGACGGGCGGGGACAGG
AAACAGATCACGGAAACGAATGAGAATCACATTTCAAGAATTTCGCTTTTTAACGACTTT
ATATATTGGACCAGGAGAAGCAGCATCGAAAGAGCCAACAAAACTACAGGAGCTAATAGG
GTAATCATTCAACCATCCATCGACGATCCCCGTGAAGATATCCTCGACATGCTGGTTTAC
CACACGTCCAGGCAGTCCGGAGTTTCGGCATGCTCTTTTGACAACGGCGGCTGCGAACAC
CTGTGTCTAGCCATACCGGGCGGTACTCACAAATGTGACTGTCCGGCCCACTACAAACTC
AACAAGGACAACGTCACATGTACTGCCCCGGACAATTTCATATTGTTTCATCAGGAGAGA
TACATCAGCAGAATCGTTTTGGAGCACGGCATTACAGGAGCCCAGAGCCCAGACACCGTT
CTACCGATACGGGGCTTGGTTAACGTGTGCGCGATAGACTACGACCCCGTCGGGGACTTC
CTGTATTGGATAGACTGCAGCTTGGGTGAAATAAAACGTTCTAGGATGAATGGAACGGAG
GTCACAACGATTTTGGGAAACAAAGAACACAGCTTGCGCTACCCTTACGACTTGAGCATC
GAGCCATATGGAAGAATGCTATTTTGGTCTGATAGCAGCAATAACTCGATCAACGTCATG
ACTCTCGATGGCAAAGTGATCGGCACGGTTGTCAGTAATTCTGTTATGACCGGAGCACAA
ATGACCTCTGTCACAGTAAACCCAAGGAAGATAGCCGTGCATTCAAAGAATGGGTTTCTC
TTCTTCAGTAGCGTGTGCACGGATGCCACGGCTTGTCGTGTAAAAATCCTTCGCTGTACC
TTGGATGGCTCCGACTGCCTCGTCCTATTCAACAAGGGCCTGAAGAAAGTATCTGGGATC
ACTGTGGATGAGGACAAGTTGTACTGGACCGATGAAGAACTACAAAAGATCCATTCAAGT
AATCTTGATGGAAGCTCCCACGCACCGTTCGTGGATTCTGAGCTCGGAAAGCCAGTAGGG
ATAACGATATTCGGGCCCAATGTGTATTGGTTTGATCAGACGGCTGATGGCGGGCAAATC
AAAAGCGTCAGAAAGTCGGGCAAAGATCCTAAGATAATTCAAGGAATGATAAGGGATCTC
AAAGGAATAGTCGGTGTTACGAACATAAAGAAAAAAGAACTCGACAATCATCCATGTACC
AACAATAACGGCCGGTGCTCTCACATCTGCATAGGCAACGAAGATGGGACAACCAGATGT
TCCTGCCCGAACCACCTTACGCTGGAGGATTTCAAATGTGCACCCATGTCGCCTCATAGA
GAAGACACAATGCTGCCAATATACAATGCGATAGCCTACAATATCTACAATGGACAGATA
TTACGGTTAATAAAAGCGTGGCGTGACGCTCAACCCAATAATGAAATAATAAGCTAATGA
ATAATTAAACCTTTCACAGTTGAAACACCCCCTTGTCTCCCGAATCAATTCACCTGCGCT
TCAGGAGGCGTCAGATGCATTCCTGGAGGCTGGAGGTGCGACAACAAAGATGAACCAGAA
TGCACAGACGGCTCGGACGAGATCGGCTGTCCGGCGTGCGGCTCCGCGGACACGTTCCGG
TGCGGGACCGGTATGGGAGGCACAGAGGAAGAGACGGCTAGGGCTGCGGATCAACTAAGC
ATATTCTGGGGCGTCCTGTCGGAGCTGGATACGGGTCAATGCATCCCTCTCTCTGCGAGA
TGTGACGGTAAACCGGATTGCTTGGATGAATCTGACGAGAATAATTGCTACTGCAAATCG
AACGAATTCACCTGCAGCAACAGACAGTGTATTCTGGTCAGCGAGAAATGCGACGGCGTC
CCCAACTGTCATGACGAATCAGACGAGTTAACGAGCATTTGCAGAGAAGTGTCTGCTCAA
CCCCAGAACCCAGACTCGACTCTCATCATAGTTGTGATAGTCGCAGTTTGCAGCACAGTC
ATTATCGCAGTCATAATATTCAGCTTCAGAAAACGAAAGTCTCGCAACAACACCGCAAAC
CCAGTGGTATGGTACAATTCCCGCGACTGCATGGAAGGCCGGATAAGCGTGAACGTACAG
ATGACCTCTCACGGTGACCACTTGGCCCAGGTCAATCAGCACGGTATGCAGTCATCCCAC
CCGATCAAACCCCCGAAAAAGGTCACGGGAGGAAAGTCGTCCACCGCCTCTGTCAACGTG
TCGATCGTTCCCACGAACTCTAACCCCGGGACTCACGTCGTCAGTGCACAAGTGCCGTAT
GGCAGACCACCTCATCCCGGCGTGGGTCACCCGTCTTACGGCTCCATACCTCCGTATGGT
AATTTTGGCATGGGCGACCATGTCGTGATGCCGGGCGACCCTCACCTGATGATTTATGAG
AGACCAAATATCACCGGGGCTTCATCGAGTAGTTCCAGCACCAGGACCAATCTTACTAAA
CAATTTCCCCCTACTCTCAATCCGCCTCCGTCTCCTGCCACCGACAGATCCGGATCGAAG
AGCACTGGAGAATGTGTCTATTTGTCGGACAGTCCATCCAACACAGTCTCCTACTGCAGA
TGTAGAAGCGGACACGGGCACAGGCGGTCACACCATCATCGAAACCTTGTGCACGCACCG
CCGCCACCAACGCCTTGCACGTCAGACACTTGCGACGATTTCGACAACAGCAGCAGGAGG
AGCAAGCCGTCGTCCCCTCCGCCGCCGTATTGTCCGCACTGCTGTTACTATTACCATCAT
CAGTGCATGGGTTATAACGGATACCACCCTTACCCACCTCCCTCCTCTTACCATTCGTCA
CATCACAGCTACCACACCCCTCCTTTGATTCCTGGGGATGCTCATCCGAATTCTTCATCG
TCCGGTTCGTCGCAGCACGTCCTTGCCCCAGCTTGCCCTATGCAGTGCTACCAAAGGCCT
TCATCGTCTTCAGGCAGAAGGCACCCTTCATCGGGCAGAAATTCCAGGAACTCGTCAGCA
AACCCGAACCCGCCCCGGTACCACAACGTCATGTCGTCAGACTTGAACTCTGACTCGGAT
CCCTTCGCCCCTCCTCCGACTCCCCGTAGCCAGTACATGTCGGACTGCTGCTACACTCAC
GACGAGGCGGATGACAACCCCGATGATGAATCAACTAGGTTCGTTAACCGGGTGGATGAG
GAGACGGATGCGGGAGATCCGGAGGAGCAGGAGGACGCATCAAAAAATCTTTTAGAATCC
GAAAAATCAGGTGAGACCGTAATCAAAACATCAGATATCACAGAGACAGAAGCGAGTCCT
CTTAAAAGAGAGGAGCATGATGATGAAGATGATAATGATCACAAAATTCCTGAAGATGAA
CATTTAGATCAGGAGGAACAGGGTGAGGAGGACGCGACAGAGCATGACGCTTTGTTATCG
CCGGATTCCGCTCAGGATATGCATTATCATCCTCCCTACAACCCGCCTCCGTCTCCAGTA
ACCGATTCATCTTGA
| SMART |
EGF-like_dom (IPR000742) - T[36-75] 1.0 - T[343-380] 0.026 - T[650-688] 0.086 - T[978-1014] 2.7 |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[71-380] 4.3E-122 - T[381-676] 7.6E-96 - T[677-1020] 9.8E-84 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[103-145] 1.0E-4 - T[146-188] 2.4E-12 - T[189-232] 3.6E-12 - T[233-275] 8.6E-13 - T[276-316] 1.9E-4 - T[408-449] 0.81 - T[450-492] 1.9E-9 - T[493-536] 8.9E-12 - T[537-580] 2.4E-5 - T[581-619] 61.0 - T[719-761] 3.9E-6 - T[762-807] 0.0025 - T[818-866] 22.0 - T[867-907] 1.6E-7 - T[908-950] 19.0 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[123-165] 13.126 - T[166-208] 14.31 - T[209-252] 16.445 - T[253-295] 10.922 - T[296-339] 5.724 - T[427-469] 12.662 - T[470-512] 14.542 - T[513-557] 13.614 - T[558-600] 9.39 - T[601-639] 5.097 - T[739-784] 11.641 - T[785-830] 8.903 - T[838-883] 4.796 - T[885-927] 13.289 |
| Pfam |
LDLR_classB_rpt (IPR000033) - T[124-163] 1.5E-5 - T[166-206] 2.7E-8 - T[212-250] 1.1E-9 - T[470-510] 2.2E-6 - T[513-555] 8.7E-7 - T[885-924] 4.1E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP4_HUMAN | 36.041 % | 630 | 0 |
| LRP6_HUMAN | 47.945 % | 970 | 0 |
| LRP5_HUMAN | 48.739 % | 944 | 0 |