- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1771.g08863.02.t
Possible name(s)
DDX18; DDX31; DDX55
Gene model
Location
S1771 [2,618 / 3,821]
Amino acid sequence
Length: 401
>Haaura.CG.MTP2014.S1771.g08863.02.p
MTTETDLSINLVGTDTLELRRKSKKRFYGKNNFRARKILKIKQKSRKNVSLVHKKPKTLH
TNHPPQAPVNLESNDLDLKSENSTALHFKSVEVDITNLTKKKTKKRKVDGAKDGNKRPKA
RKVAPEPQGIKVGHGKVAGKLVKSSLFNQNPEISKVQQPELTSVEEKVFSGKHFSDLNVH
PYLVSYLSEHLKLDNMTLIQQRAIPELLEFKDALIKSQTGSGKTLAYALPVMQGIITIDP
PITRIDGPVALVLVPTRELALQSFNLFSKLTRSFCRIVSTWLIGGESKKSEKSRIRKGAN
IIVGTPGRVLDHIQTTTCLSLKNLRWVVFDEADRMLDMGFQKQVDSILEAVRNQTVHKKQ
IILLSATLSEKVERMATLALENPVLINATEDTNDSGISSAD
Nucleotide sequence
Length: 1,203
>Haaura.CG.MTP2014.S1771.g08863.02.t
ATGACAACGGAAACTGACTTGAGCATCAATCTCGTAGGTACAGATACATTAGAACTCCGA
AGAAAGAGCAAGAAACGATTTTACGGTAAAAATAATTTTCGTGCGCGTAAAATTTTGAAG
ATAAAACAAAAATCAAGAAAAAATGTATCTCTGGTTCACAAGAAACCGAAAACACTACAC
ACAAACCATCCTCCGCAAGCCCCCGTAAATTTAGAGAGCAATGATCTAGATTTGAAAAGT
GAGAACAGCACCGCATTGCACTTTAAAAGCGTTGAGGTTGATATAACCAACTTGACGAAA
AAAAAGACGAAGAAGCGTAAGGTAGATGGGGCCAAAGATGGAAATAAAAGACCGAAGGCG
AGAAAAGTAGCACCGGAACCTCAAGGCATAAAAGTGGGACATGGTAAAGTTGCAGGAAAA
TTAGTTAAATCTTCTCTTTTTAATCAAAATCCGGAAATTTCCAAAGTGCAGCAACCCGAG
CTAACCAGTGTTGAAGAAAAGGTTTTCTCTGGAAAACATTTCTCAGACCTGAATGTACAT
CCTTATTTGGTGTCTTACTTGAGTGAACATTTAAAATTGGATAACATGACATTGATACAA
CAAAGGGCTATTCCAGAACTTCTTGAATTCAAAGATGCATTAATAAAATCACAAACAGGT
TCTGGAAAGACGCTCGCGTATGCCCTTCCCGTAATGCAAGGCATTATCACCATTGACCCC
CCGATTACTAGGATAGATGGACCAGTGGCTCTTGTACTCGTGCCGACGAGAGAACTGGCA
CTCCAGTCGTTCAACCTTTTCAGTAAACTGACAAGGTCATTTTGTAGGATTGTTTCGACA
TGGCTGATCGGAGGAGAAAGTAAAAAGTCTGAGAAATCTAGAATTCGCAAAGGCGCCAAT
ATCATTGTCGGCACTCCGGGAAGGGTACTCGACCACATCCAGACGACTACCTGCTTGTCC
TTGAAAAATCTACGATGGGTCGTGTTCGATGAAGCTGATCGCATGCTTGATATGGGATTT
CAAAAGCAAGTGGATTCTATTCTCGAAGCTGTGAGAAATCAGACAGTGCACAAAAAACAA
ATCATTTTGCTGTCAGCCACTCTCTCTGAGAAAGTCGAAAGAATGGCAACACTCGCTCTT
GAAAATCCAGTACTTATAAATGCAACCGAAGACACCAATGATAGCGGCATATCCTCAGCT
GAT
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[167-387] 1.58E-58 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[172-201] 7.962 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[192-399] 2.7E-45 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[197-374] 6.5E-48 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[204-386] 31.188 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[328-336] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 35.135 % | 139 | 9.52E-36 |
| DDX18_HUMAN | 37.143 % | 140 | 1.34E-36 |
| DDX31_HUMAN | 51.793 % | 269 | 1.19E-82 |