- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1771.g08863.01.t
Possible name(s)
DDX18; DDX31; DDX55
Gene model
Location
S1771 [1,086 / 3,821]
Amino acid sequence
Length: 773
>Haaura.CG.MTP2014.S1771.g08863.01.p
MTTETDLSINLVGTDTLELRRKSKKRFYGKNNFRARKILKIKQKSRKNVSLVHKKPKTLH
TNHPPQAPVNLESNDLDLKSENSTALHFKSVEVDITNLTKKKTKKRKVDGAKDGNKRPKA
RKVAPEPQGIKVGHGKVAGKLVKSSLFNQNPEISKVQQPELTSVEEKVFSGKHFSDLNVH
PYLVSYLSEHLKLDNMTLIQQRAIPELLEFKDALIKSQTGSGKTLAYALPVMQGIITIDP
PITRIDGPVALVLVPTRELALQSFNLFSKLTRSFCRIVSTWLIGGESKKSEKSRIRKGAN
IIVGTPGRVLDHIQTTTCLSLKNLRWVVFDEADRMLDMGFQKQVDSILEAVRNQTVHKKQ
IILLSATLSEKVERMATLALENPVLINATEDTNDSGISSADGNEETYALPRNLLQYVAVV
PSKLRLVSLVTFLTCKQMEDSSCKILIFLSSRDSVEFHYHLLKHVMRQPKSQIVRSIPLD
VELDAQEVAELSVFRLHGGMTQNKRESMFNIFGSSQGGILLCTDVAARGLDIPFVDWVIQ
YTSPGSPIDYIHRVGRTARAGRKGQALLFLTPSEARYVSLLTQFNIKVNEMTVDDILHLV
LDPKQKRKKAKSNPRLDNLVKENATSLQNQMEYYVTKNGRIKSLAKSAFASFVRAYATYP
KEMKTIFHVKYLHLGHVVKSFALAEAPTDVVKDLHKSVGHLRINTSFEHRETKASEDMSK
DEAEKKATTVKRKLANKNNRYKEKVPTKSRSLEYCFLRPQLDIFCPSLIKDR*
Nucleotide sequence
Length: 2,340
>Haaura.CG.MTP2014.S1771.g08863.01.t
ATGACAACGGAAACTGACTTGAGCATCAATCTCGTAGGTACAGATACATTAGAACTCCGA
AGAAAGAGCAAGAAACGATTTTACGGTAAAAATAATTTTCGTGCGCGTAAAATTTTGAAG
ATAAAACAAAAATCAAGAAAAAATGTATCTCTGGTTCACAAGAAACCGAAAACACTACAC
ACAAACCATCCTCCGCAAGCCCCCGTAAATTTAGAGAGCAATGATCTAGATTTGAAAAGT
GAGAACAGCACCGCATTGCACTTTAAAAGCGTTGAGGTTGATATAACCAACTTGACGAAA
AAAAAGACGAAGAAGCGTAAGGTAGATGGGGCCAAAGATGGAAATAAAAGACCGAAGGCG
AGAAAAGTAGCACCGGAACCTCAAGGCATAAAAGTGGGACATGGTAAAGTTGCAGGAAAA
TTAGTTAAATCTTCTCTTTTTAATCAAAATCCGGAAATTTCCAAAGTGCAGCAACCCGAG
CTAACCAGTGTTGAAGAAAAGGTTTTCTCTGGAAAACATTTCTCAGACCTGAATGTACAT
CCTTATTTGGTGTCTTACTTGAGTGAACATTTAAAATTGGATAACATGACATTGATACAA
CAAAGGGCTATTCCAGAACTTCTTGAATTCAAAGATGCATTAATAAAATCACAAACAGGT
TCTGGAAAGACGCTCGCGTATGCCCTTCCCGTAATGCAAGGCATTATCACCATTGACCCC
CCGATTACTAGGATAGATGGACCAGTGGCTCTTGTACTCGTGCCGACGAGAGAACTGGCA
CTCCAGTCGTTCAACCTTTTCAGTAAACTGACAAGGTCATTTTGTAGGATTGTTTCGACA
TGGCTGATCGGAGGAGAAAGTAAAAAGTCTGAGAAATCTAGAATTCGCAAAGGCGCCAAT
ATCATTGTCGGCACTCCGGGAAGGGTACTCGACCACATCCAGACGACTACCTGCTTGTCC
TTGAAAAATCTACGATGGGTCGTGTTCGATGAAGCTGATCGCATGCTTGATATGGGATTT
CAAAAGCAAGTGGATTCTATTCTCGAAGCTGTGAGAAATCAGACAGTGCACAAAAAACAA
ATCATTTTGCTGTCAGCCACTCTCTCTGAGAAAGTCGAAAGAATGGCAACACTCGCTCTT
GAAAATCCAGTACTTATAAATGCAACCGAAGACACCAATGATAGCGGCATATCCTCAGCT
GATGGCAATGAGGAAACCTACGCCCTGCCTCGAAATTTACTTCAGTATGTCGCTGTCGTA
CCGAGTAAACTAAGATTGGTATCGCTGGTTACTTTTCTCACCTGTAAGCAAATGGAAGAC
AGCTCGTGTAAAATCCTGATCTTTCTATCCAGTCGAGATTCTGTTGAATTCCACTATCAT
CTTTTAAAACATGTCATGCGTCAGCCCAAATCTCAAATCGTTCGATCGATTCCACTCGAC
GTAGAATTGGATGCTCAAGAAGTGGCTGAACTCAGTGTCTTTCGACTTCATGGTGGCATG
ACACAGAACAAGCGTGAGAGCATGTTCAACATCTTCGGTTCTTCACAGGGTGGAATTTTG
TTGTGTACAGACGTCGCTGCACGTGGTTTGGATATCCCTTTTGTCGATTGGGTGATTCAA
TACACGAGTCCAGGAAGTCCTATCGACTACATACATAGAGTTGGCCGCACTGCTAGGGCT
GGAAGAAAAGGGCAAGCTCTTCTCTTTTTAACACCTTCAGAAGCGAGGTATGTCAGCTTA
CTCACGCAATTTAACATAAAGGTCAATGAGATGACGGTTGACGACATTCTGCACCTTGTT
CTCGACCCAAAACAGAAACGAAAGAAGGCTAAATCAAATCCGAGATTGGACAATTTGGTT
AAGGAGAATGCGACTTCGCTTCAAAACCAAATGGAATATTATGTTACAAAAAACGGTAGA
ATAAAATCCCTGGCAAAGAGTGCATTCGCATCATTCGTTCGTGCTTACGCAACATACCCC
AAAGAAATGAAAACAATTTTTCATGTGAAATATTTACATCTCGGACACGTGGTCAAAAGT
TTCGCTTTAGCCGAAGCACCGACGGACGTCGTCAAGGACCTTCACAAATCCGTTGGGCAT
CTACGGATCAACACTTCGTTCGAACATAGAGAAACGAAGGCCTCTGAGGACATGTCAAAA
GATGAGGCGGAGAAAAAAGCAACAACTGTAAAGCGGAAACTGGCAAATAAAAATAACAGA
TACAAGGAAAAAGTACCAACTAAAAGCAGATCGTTGGAATATTGCTTTTTAAGACCACAA
CTAGATATTTTCTGTCCTTCACTCATAAAAGACAGATAAAGAAGATTATTCTTCCAAGTT
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[172-201] 7.962 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[192-399] 2.7E-45 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[197-374] 2.4E-47 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[204-386] 31.188 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[246-579] 1.48E-63 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[328-336] . |
| CDD |
Helicase_C (IPR001650) - T[414-569] 4.38758E-30 |
| Pfam |
Helicase_C (IPR001650) - T[433-561] 4.1E-22 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[437-597] 19.786 |
| SMART |
Helicase_C (IPR001650) - T[460-561] 6.7E-25 |
| SMART |
DUF4217 (IPR025313) - T[626-691] 3.8E-22 |
| Pfam |
DUF4217 (IPR025313) - T[628-687] 3.5E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX18_HUMAN | 35.13 % | 280 | 4.55E-84 |
| DDX55_HUMAN | 31.214 % | 221 | 5.42E-63 |
| DDX31_HUMAN | 47.518 % | 503 | 5.26E-167 |