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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1736.g08811.01.t

Possible name(s)

ACTA2; ACTB; ACTG1

Gene model

Haaura.CG.MTP2014.S1736.g08811

Location

S1736 [985 / 1,510]

Sequences

Amino acid sequence

Length: 113

>Haaura.CG.MTP2014.S1736.g08811.01.p
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKV

Nucleotide sequence

Length: 339

>Haaura.CG.MTP2014.S1736.g08811.01.t
GACGAAGATGTTGCTGCTCTTGTTGTCGACAATGGTTCCGGTATGTGCAAGGCCGGTTTC
GCGGGAGATGACGCTCCACGTGCCGTGTTCCCATCCATCGTAGGACGTCCCAGACATCAG
GGAGTCATGGTTGGTATGGGTCAGAAAGATTCGTATGTGGGTGATGAAGCTCAAAGCAAG
AGAGGAATTCTGACATTGAAATATCCGATCGAACACGGAATTGTCACCAACTGGGATGAT
ATGGAAAAGATATGGCATCACACATTCTACAATGAACTTCGTGTGGCCCCAGAAGAACAC
CCTGTCCTCCTTACTGAAGCCCCACTTAACCCCAAGGTA

InterProScan

PANTHER
Actin (IPR004000) - T[1-112] 2.3E-77
Pfam
Actin (IPR004000) - T[2-112] 2.7E-39
PRINTS
Actin (IPR004000) - T[25-34] 3.7E-24 - T[48-59] 3.7E-24 - T[60-82] 3.7E-24
ProSitePatterns
Actin_CS (IPR004001) - T[52-62] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTG_HUMAN 96.429 % 237 2.83E-79
ACTB_HUMAN 98.214 % 239 4.56E-80
ACTA_HUMAN 92.857 % 229 2.44E-76