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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1710.g08771.01.t

Possible name(s)

NASP

Location

S1710 [1,315 / 12,040]

Sequences

Amino acid sequence

Length: 556

>Haaura.CG.MTP2014.S1710.g08771.01.p
VPQDSLYTFLFGTVLFGDNCKQLLKMVQDTEVVEAGSSKETETTVDVEKEIQECMGAGKK
DLLCNDYSEAVNCFQEACTLLSGKHGQMAEECCEAYYYYGVSLLELARLENGVLGNALKG
VPEEDADGDSDQEQEQFEKPDLPETEREKLREEVEAAMATEDEDTQEEDDAEESGEKKED
DKPKESEKPAEKSDEKDKEEKPAKVESSTVKEVKDEKSSDKPVESSNTEEPGTSGTSSSK
ENESEEDPDDISNMQLAWEMLELAKVLYKKHDKSKANKQMVAQCHLKLGELGLEVENHPQ
AIGDFLECLVIQKDLLPETDRKLAETYYNLGLAYSFEKRYDNALEHYQNALDVLEARVDM
LNELIESNEGNKEKEKETISECKEVGELKELIPDINSKIEDVILAKKQMQKLDGSPFRQA
SEGESSAGFGASTSDDKPCTTIPIRKVAPTSVPVAKDSPSDITHLVRRKRSSPDEDNQPA
ESKENESKKAKQEDTEEATNGHSAVKKDTDGTDKNGTNGHSKTPKKDGAKDCENTADSLK
KKIAAAGDAPVQMET*

Nucleotide sequence

Length: 1,668

>Haaura.CG.MTP2014.S1710.g08771.01.t
GTTCCTCAGGACTCATTGTATACTTTTCTATTTGGTACTGTTTTATTTGGTGATAATTGC
AAACAATTGTTGAAAATGGTTCAAGATACAGAAGTTGTTGAAGCTGGAAGCAGCAAAGAA
ACTGAAACTACTGTTGATGTAGAGAAGGAGATTCAAGAATGCATGGGTGCTGGAAAAAAG
GATCTGCTATGTAATGATTATTCAGAAGCAGTCAACTGTTTTCAAGAGGCCTGCACACTA
CTTTCTGGAAAACATGGACAAATGGCCGAGGAGTGCTGTGAGGCATATTATTATTACGGC
GTTTCTCTGCTCGAATTAGCAAGGCTTGAAAATGGAGTTCTGGGCAATGCACTTAAAGGA
GTACCGGAGGAAGATGCTGATGGAGATTCTGACCAGGAGCAAGAACAGTTTGAGAAGCCA
GATTTGCCAGAAACTGAACGAGAAAAACTGAGGGAAGAGGTCGAGGCTGCCATGGCAACA
GAAGATGAAGATACTCAGGAGGAAGATGATGCCGAGGAGAGTGGAGAAAAGAAAGAGGAT
GACAAACCTAAAGAGTCTGAAAAGCCCGCTGAAAAATCGGATGAGAAGGACAAGGAAGAG
AAGCCAGCGAAAGTTGAAAGCAGTACAGTGAAGGAAGTGAAGGATGAAAAGAGTAGCGAC
AAGCCTGTTGAAAGTTCGAATACTGAAGAGCCTGGAACATCTGGTACATCGTCTAGCAAA
GAAAACGAGAGTGAAGAAGATCCTGATGACATTTCGAACATGCAGCTTGCTTGGGAGATG
CTCGAGTTGGCAAAAGTTTTGTATAAAAAGCATGATAAATCAAAAGCCAACAAGCAAATG
GTCGCTCAGTGTCATTTGAAATTGGGTGAACTTGGACTGGAAGTTGAGAATCATCCTCAG
GCAATTGGAGATTTCTTGGAATGTCTGGTCATACAAAAGGATCTTCTGCCTGAAACGGAT
CGTAAGCTTGCTGAGACATACTACAACCTAGGCCTCGCCTATAGTTTTGAGAAGCGTTAT
GACAATGCTCTGGAACATTATCAGAACGCTTTGGACGTACTTGAAGCACGAGTGGACATG
TTGAATGAGTTGATTGAAAGTAATGAAGGAAACAAAGAGAAAGAAAAGGAAACCATCAGT
GAATGCAAGGAAGTTGGTGAACTGAAAGAACTCATTCCTGACATTAATTCTAAGATTGAA
GATGTCATTTTAGCAAAAAAACAAATGCAAAAGCTCGATGGCTCTCCTTTCCGGCAAGCG
AGTGAAGGAGAAAGCAGTGCTGGTTTTGGTGCATCAACTTCGGATGACAAGCCATGCACT
ACCATACCTATTCGCAAAGTAGCGCCCACCTCGGTTCCTGTTGCAAAAGATTCTCCAAGC
GACATTACTCATCTTGTCAGAAGAAAGAGATCATCCCCTGACGAAGATAACCAGCCGGCC
GAATCGAAAGAAAATGAATCAAAGAAGGCAAAGCAAGAGGACACAGAAGAAGCGACAAAT
GGTCATTCAGCGGTCAAAAAAGATACAGATGGAACTGATAAGAATGGTACAAATGGTCAT
TCCAAAACGCCTAAAAAGGATGGAGCCAAAGACTGCGAAAATACTGCTGATTCACTAAAG
AAAAAAATAGCTGCTGCGGGTGATGCCCCTGTCCAGATGGAGACCTGA

InterProScan

SMART
TPR_repeat (IPR019734) - T[51-84] 300.0 - T[282-315] 52.0 - T[324-357] 4.5E-5
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[202-389] 5.5E-23
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[256-365] 1.05E-12
Pfam
Tetratricopeptide_SHNi-TPR_dom (IPR019544) - T[282-318] 2.9E-9
ProSiteProfiles
TPR_repeat (IPR019734) - T[282-315] 5.93 - T[324-357] 11.623
Pfam
TPR_1 (IPR001440) - T[324-352] 7.1E-8
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[324-357] 12.09

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NASP_HUMAN 38.462 % 161 3.1E-42