- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S169.g02911.02.t
Possible name(s)
TRIM2; TRIM3; TRIM71
Gene model
Location
S169 [4,067 / 7,179]
Amino acid sequence
Length: 737
>Haaura.CG.MTP2014.S169.g02911.02.p
MEPNIIPFDRSSASNAQSSFELNDLKSRAAEENENHLSTYLIEGILESFSLHDNDYDKIS
EKKASCSCDDGSVASSYCLDCKDYLCSKCVSAHYRVKLTKDHNMTPVSSYQMYGQANMKV
KDLMSNSLSDSKSLTDHDPSCCELHPNEVLRLYCDLCSVAICSPCAVLNHSGHNIRYLKQ
AIDASKMELLSLLSEAKAQMNALEKISQNVKTTVENLDTQANTVRTEIQATIRKITTVLE
NRQHNLVYSVQQIRQEKFKVLCSQIKTIHQGNNDLKLLVDQVKQTFDTGSNMEILKAKES
LSAALVSANHLLTRNRVPHEDSNIIFSVCDPGVQEIIGGIGKVSGGASATFSMVSGMGVS
KAKCNKFSHFEVITFNPLGEPCSTGSDPVHVVITGPDGTALPFEFIDRQDGTYTVRYQPV
VEGEHIIMVTIRGRPVVDSPFRVCVKRSQQYFEGSGIPRLMFGSEGEKDGQLCRPWGIAC
DSRGYFVVADRSNNRIQIFTPDGSFLRKFGNPGKRPGQLDRPAGVVVDQDHRIILADKDN
HRIQIFTFNGNFLLMFGERGSKNGQFNYPWDVASDSRGMIAVTDTRNHRVQLFNSEGMFI
SKYGFEGMMWKHFDSPRGIDFISNTSALVVSDFNNHRLVIIQPDLRSARFLGSEGSQPSQ
FLRPQGVAVDEDGNFVIADSRNHRLQVFSPSGTFIAMLGGTQGNGPNQMDRPSGIAIMPN
AGIAVVDFGNNRILVY*
Nucleotide sequence
Length: 2,211
>Haaura.CG.MTP2014.S169.g02911.02.t
ATGGAGCCCAATATCATACCTTTTGATCGCTCGTCCGCGTCAAACGCTCAGAGCAGTTTC
GAGCTGAATGATCTCAAAAGCCGAGCGGCTGAAGAAAATGAGAATCATTTGTCGACATAT
TTGATAGAAGGAATATTGGAAAGTTTTTCCTTGCACGACAATGATTATGATAAGATTTCG
GAGAAGAAGGCATCTTGTTCCTGTGACGATGGGTCGGTCGCTTCTTCCTATTGCCTTGAT
TGCAAAGATTACCTTTGTTCAAAATGTGTGTCCGCTCATTATCGTGTGAAACTTACAAAA
GATCATAACATGACACCTGTATCTTCATATCAAATGTATGGACAAGCAAACATGAAGGTC
AAAGATCTCATGTCCAACAGTTTGTCAGATTCCAAATCATTGACTGATCATGACCCAAGC
TGTTGTGAATTACATCCAAATGAAGTGCTACGCCTTTATTGTGATTTGTGCTCAGTGGCT
ATATGTAGTCCTTGCGCAGTTCTCAATCACAGCGGTCACAATATCCGATACCTCAAGCAA
GCGATAGACGCGAGCAAAATGGAACTATTATCTCTGCTCTCAGAAGCCAAAGCACAAATG
AATGCGTTGGAAAAAATATCGCAAAATGTTAAAACCACCGTAGAGAACCTGGATACCCAA
GCCAATACTGTACGCACCGAGATTCAAGCCACCATTCGTAAGATCACTACAGTACTCGAG
AACAGACAACACAATCTGGTTTATAGCGTGCAACAAATTAGACAGGAGAAATTCAAGGTC
CTATGTAGCCAAATAAAAACGATACATCAAGGAAACAATGACCTGAAACTCTTAGTGGAT
CAAGTGAAACAAACTTTTGATACTGGAAGTAATATGGAAATCTTGAAAGCAAAGGAAAGT
CTCTCAGCTGCTCTAGTTTCCGCCAACCACTTGCTAACAAGGAACCGCGTCCCTCATGAA
GATTCTAACATCATTTTCTCTGTGTGCGATCCTGGAGTTCAAGAGATTATTGGAGGGATT
GGTAAAGTATCCGGCGGGGCATCGGCCACTTTTTCGATGGTCTCTGGAATGGGTGTATCA
AAAGCAAAATGCAACAAATTCAGTCACTTTGAGGTCATTACATTTAATCCACTGGGTGAG
CCTTGTAGCACTGGCAGCGACCCTGTTCATGTGGTCATCACTGGACCAGATGGAACAGCG
TTGCCGTTTGAATTTATTGACCGCCAGGACGGCACCTATACAGTCCGTTATCAGCCAGTA
GTGGAAGGTGAGCATATAATAATGGTCACCATCCGCGGGCGTCCTGTTGTGGACAGCCCG
TTTCGTGTGTGCGTGAAACGTTCTCAGCAATATTTTGAAGGCAGTGGAATCCCAAGATTG
ATGTTCGGGAGTGAAGGGGAAAAAGACGGGCAACTTTGTAGACCATGGGGCATCGCTTGC
GATTCTCGTGGTTACTTTGTTGTCGCAGACAGAAGCAATAACAGAATTCAGATTTTCACA
CCAGATGGTAGTTTCCTGAGAAAATTTGGCAACCCAGGAAAGCGGCCCGGTCAGCTCGAC
AGACCGGCCGGTGTCGTGGTCGACCAGGACCATCGTATTATCTTAGCGGACAAGGATAAT
CATCGTATACAGATTTTCACGTTCAACGGGAATTTCTTGCTCATGTTTGGTGAAAGAGGT
TCTAAGAATGGACAGTTCAATTATCCCTGGGACGTCGCCTCGGACTCCAGAGGCATGATA
GCCGTGACAGATACCCGCAATCACAGAGTACAGCTGTTCAATAGCGAAGGTATGTTTATC
AGTAAGTATGGGTTTGAAGGGATGATGTGGAAACATTTCGATTCACCTCGGGGAATCGAT
TTTATTTCAAACACATCAGCTCTGGTTGTTTCCGATTTTAACAACCACCGACTTGTCATC
ATCCAACCTGACCTTAGGTCGGCTCGTTTCTTAGGCTCGGAGGGTTCTCAACCCTCTCAG
TTTTTGCGTCCTCAGGGTGTGGCAGTAGATGAAGATGGGAATTTTGTCATCGCTGACTCT
AGAAACCATAGGTTGCAGGTCTTTTCGCCTTCTGGCACATTTATCGCTATGCTTGGAGGT
ACACAGGGTAACGGACCGAATCAAATGGACCGTCCTTCGGGCATAGCCATTATGCCCAAT
GCTGGCATAGCTGTGGTTGATTTCGGAAACAACCGCATTTTGGTGTACTAG
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[61-107] 10.779 - T[137-178] 10.48 |
| SMART |
Znf_B-box (IPR000315) - T[61-107] 0.031 - T[137-178] 2.2E-4 |
| Pfam |
Znf_B-box (IPR000315) - T[139-176] 1.9E-7 |
| CDD |
Znf_B-box (IPR000315) - T[142-176] 1.80275E-7 |
| SMART |
Bbox_C (IPR003649) - T[185-311] 0.0016 |
| ProSiteProfiles |
Filamin/ABP280_repeat-like (IPR017868) - T[344-445] 24.959 |
| Gene3D |
Ig-like_fold (IPR013783) - T[346-447] 3.4E-24 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[348-445] 5.6E-25 |
| SMART |
Filamin/ABP280_rpt (IPR001298) - T[348-448] 1.1E-26 |
| Pfam |
Filamin/ABP280_repeat-like (IPR017868) - T[349-442] 6.9E-18 |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[448-550] 5.2E-34 - T[551-648] 4.8E-20 - T[649-736] 2.2E-25 |
| ProSiteProfiles |
NHL_repeat_subgr (IPR013017) - T[462-502] 16.16 - T[506-549] 14.186 - T[556-596] 15.954 - T[600-644] 9.355 - T[648-691] 16.509 - T[703-736] 8.471 |
| Pfam |
NHL_repeat (IPR001258) - T[472-499] 1.0E-6 - T[519-546] 2.1E-7 - T[566-591] 4.7E-7 - T[661-688] 1.1E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LIN41_HUMAN | 47.556 % | 642 | 0 |
| TRIM2_HUMAN | 26.761 % | 243 | 5.45E-70 |
| TRIM3_HUMAN | 28.906 % | 271 | 3.41E-80 |
