- Clone 'cign072i19' >
- Clone 'AHC0AAA55YJ19' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1673.g08729.01.t
Possible name(s)
ITGB1; ITGB2; ITGB3
Gene model
Location
S1673 [5,699 / 11,508]
Amino acid sequence
Length: 866
>Haaura.CG.MTP2014.S1673.g08729.01.p
MKTLLYLWLSTAVLYGVFANLCVETNTKSCGDCMQVAGCGWCDEAKYADNPNLIISRCDL
PENLIARNCSKHRIVNPPSSVKATVNAAHSGVGSSDVGTATQLKPQKFEGELRPGTPVDI
TLSYKQAEDYPVDLYYLLDLSNSMEDDLESLRKLGKELGESMASITRDFRLGFGSFVDKT
VMPFISTVPNVKKNPCWPKLVCQPTYSFSNDLPLTDSIDDFVTSVNDVSHSSNIDAPEGG
FDAMMQAIVCQNYIKWRKDATHLLVYVTDAVFHYAGDGKLGGIVTPNNGHCYLDGRGRYT
KANEMDYPSVGHLVQKITDYNIQPIFAVTEKVINTYKKLQQLIPKSAVGELSANSSNIIE
LIENAYNDLKGQVLLEVATPPGIEVIKKVAHCGDGDREGLSCDGVKIGDVVNFTLSVSTT
ECFPGTKKLDVSIFGYNEKVEVTMQSLCECQCNTTDAPSANCSGHGVFDCGGCVCDTGYL
GLECSCDKKDSTAESYIVNCTNTDGEVCGNRGECLCGKCICRQMPNRKIDGKYCECDNTT
CDIINGEYCNGHGLCNCGNCICEKEWRGDGCECTKDTTGCMDPNDEEAVACHGSGLCECG
NCKCNITKSGFEYLGTYCEISPQQLCNIHKECVQCIVYGNRKEFEKNDTLCVDCQQYSVN
ILEDEETSKLRESCRAVDSTNDCTFTFWFERRSDTVYIDTNPDKQVCPMYANPMYIIIGI
IAAIVGIGLAILLIWKLLTSIKDAREYKQWRKEVQTAKWETVSRQEHRVNSSKICSLPFS
ILLLGRQSSLQERHFNFPKPDIQGWQANISVVMTRHLFLSTLGSAIHTRLFCTKCTIKLF
IARTPNGNFNYITKDEFSLCNIFFQ*
Nucleotide sequence
Length: 2,598
>Haaura.CG.MTP2014.S1673.g08729.01.t
ATGAAAACTTTATTATATTTGTGGCTTTCTACCGCTGTATTATACGGAGTATTCGCCAAT
CTGTGTGTGGAGACGAACACCAAATCATGCGGTGATTGTATGCAAGTAGCTGGCTGCGGA
TGGTGTGATGAAGCGAAATACGCGGACAATCCGAACCTGATTATTTCAAGATGTGATCTT
CCTGAGAATCTGATTGCCCGTAATTGCTCGAAGCACAGAATTGTTAATCCTCCGTCATCA
GTAAAAGCCACTGTTAACGCTGCTCATTCTGGTGTCGGTAGCTCAGATGTAGGGACTGCT
ACACAGCTGAAACCTCAAAAATTTGAAGGAGAGCTCAGACCTGGCACTCCTGTTGACATC
ACACTCTCGTATAAGCAAGCAGAAGACTATCCCGTCGATCTTTATTACTTGCTCGACCTT
TCCAACTCCATGGAAGACGATTTAGAATCTCTTCGAAAACTGGGAAAAGAACTCGGAGAG
AGCATGGCTTCTATCACCAGAGATTTTCGTCTTGGTTTCGGATCGTTTGTTGATAAAACA
GTAATGCCTTTCATATCAACTGTGCCAAATGTGAAAAAAAATCCTTGTTGGCCAAAACTC
GTTTGCCAACCAACGTATAGTTTCAGCAATGATCTTCCGCTTACTGATAGTATTGACGAT
TTTGTAACGTCAGTGAACGATGTGTCCCATTCTTCAAACATTGACGCACCTGAAGGTGGT
TTTGATGCCATGATGCAAGCTATTGTATGCCAGAATTATATTAAGTGGAGAAAAGATGCT
ACACATTTGCTCGTGTACGTCACTGATGCTGTCTTCCATTACGCTGGTGATGGCAAGCTC
GGTGGTATAGTTACCCCTAACAATGGCCACTGCTATCTTGATGGACGAGGGAGATATACG
AAAGCTAATGAAATGGATTATCCTTCCGTTGGTCATCTTGTTCAGAAAATCACAGATTAC
AATATTCAGCCGATTTTTGCAGTCACGGAAAAAGTCATAAATACTTACAAGAAATTGCAA
CAACTGATTCCCAAGTCAGCAGTCGGAGAATTGAGCGCCAACTCGTCTAATATTATTGAA
CTGATTGAGAACGCATATAATGATTTGAAAGGGCAGGTATTGCTTGAAGTAGCAACACCA
CCTGGAATCGAAGTAATTAAAAAGGTTGCTCATTGCGGTGATGGAGATCGTGAAGGTCTG
AGTTGTGACGGTGTGAAAATAGGAGATGTGGTTAACTTCACGTTGAGTGTCTCTACCACC
GAATGCTTCCCAGGCACAAAAAAGTTGGATGTTTCAATATTTGGTTACAATGAAAAAGTT
GAAGTTACTATGCAAAGTCTATGTGAATGCCAATGCAATACAACTGATGCTCCATCAGCA
AATTGCTCTGGACATGGTGTTTTTGACTGTGGAGGCTGCGTGTGCGACACTGGTTACCTC
GGCCTCGAATGCTCGTGTGACAAAAAAGACAGTACGGCAGAGTCGTACATTGTCAACTGC
ACGAACACTGACGGCGAAGTGTGCGGCAATCGGGGAGAATGTCTTTGTGGCAAATGTATT
TGCAGGCAAATGCCAAACAGAAAAATTGATGGAAAATACTGCGAATGTGACAACACAACT
TGCGATATTATTAACGGAGAATATTGTAATGGTCACGGTCTGTGCAACTGTGGCAATTGC
ATTTGTGAGAAAGAATGGAGAGGAGATGGGTGCGAGTGCACCAAAGACACGACGGGCTGC
ATGGATCCAAACGACGAGGAAGCTGTCGCCTGCCACGGTAGTGGTTTGTGCGAGTGTGGA
AATTGCAAGTGTAACATCACCAAGTCTGGTTTTGAGTATTTAGGTACATATTGCGAGATT
TCCCCACAACAGCTGTGCAACATTCACAAGGAATGTGTTCAATGTATTGTGTATGGAAAC
AGAAAAGAATTTGAAAAAAACGACACTCTGTGCGTTGATTGCCAACAATATTCAGTCAAT
ATTCTCGAAGATGAAGAAACAAGTAAATTGAGAGAATCCTGCAGAGCAGTTGATTCAACA
AATGATTGTACTTTCACTTTCTGGTTTGAACGTCGAAGTGATACAGTATATATAGATACC
AATCCAGATAAACAAGTGTGTCCAATGTATGCCAACCCTATGTATATTATCATCGGTATC
ATTGCCGCTATTGTCGGTATCGGATTGGCAATTTTACTCATTTGGAAGCTGCTCACTTCT
ATCAAGGATGCGAGAGAATACAAACAATGGAGGAAGGAGGTTCAGACTGCAAAATGGGAG
ACTGTGAGTCGTCAGGAACATCGTGTAAATTCCTCTAAAATCTGTAGTTTACCATTTTCT
ATTTTGTTACTAGGGAGGCAATCCTCTCTTCAAGAGCGCCACTTCAACTTTCCAAAACCC
GACATACAAGGCTGGCAAGCCAACATCTCAGTTGTGATGACCCGGCATTTATTCCTGTCG
ACATTGGGTAGTGCCATACACACAAGGCTTTTCTGTACCAAGTGCACGATAAAACTCTTT
ATTGCAAGAACACCTAACGGCAATTTTAATTATATTACAAAGGATGAGTTTTCTCTTTGC
AATATATTTTTTCAGTAA
| PIRSF |
Integrin_bsu (IPR015812) - T[1-775] 5.4E-242 |
| PANTHER |
Integrin_bsu (IPR015812) - T[19-765] 8.8E-233 |
| SMART |
Integrin_bsu_VWA (IPR002369) - T[29-450] 9.7E-192 |
| PRINTS |
Integrin_bsu (IPR015812) - T[58-77] 4.0E-100 - T[102-115] 4.0E-100 - T[130-148] 4.0E-100 - T[170-189] 4.0E-100 - T[202-221] 4.0E-100 - T[235-257] 4.0E-100 - T[262-277] 4.0E-100 - T[306-329] 4.0E-100 - T[342-366] 4.0E-100 - T[508-521] 4.0E-100 - T[711-728] 4.0E-100 - T[728-746] 4.0E-100 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[127-372] 3.1E-106 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[127-370] 2.3E-78 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[129-370] 1.6E-135 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[390-454] 5.75E-10 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[591-604] . |
| SUPERFAMILY |
Integrin_bsu_tail_dom_sf (IPR036349) - T[625-708] 2.35E-6 |
| SMART |
Integrin_bsu_tail (IPR012896) - T[626-712] 2.6E-4 |
| Pfam |
Integrin_bsu_cyt_dom (IPR014836) - T[736-761] 6.4E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB2_HUMAN | 37.549 % | 496 | 5.25E-164 |
| ITB3_HUMAN | 38.81 % | 494 | 6.4E-163 |
| ITB1_HUMAN | 41.562 % | 542 | 0 |