Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S166.g02895.01.t

Possible name(s)

RRP7A

Gene model

Haaura.CG.MTP2014.S166.g02895

Location

S166 [47,659 / 48,532]

Sequences

Amino acid sequence

Length: 291

>Haaura.CG.MTP2014.S166.g02895.01.p
MAREHINKTNMASRMEAPPGFKSLVIKFDKTCKFGHTLFFKPNQTRTEDTSKPKLRTLLV
LNVPPYCNKESLNRIFSLKFGDVENVILQKKIANDATEFVQKPTVTDLSLDDEKYFKSED
IKGFKLAFIIFSDTASVTRAAEYETNEKPCIISTRACPVKVGMGKWIKEYCDSIPDKNLQ
VNIDLYMSKYDTALTRAEAKEEETKDAPDEEGWIKVSRKGKHPVVPRTEANELKAKAREK
MKRKQKELINVYAYQIRESKREKIAELRRKFEEDKVRIQSMRQSRKFQPF*

Nucleotide sequence

Length: 873

>Haaura.CG.MTP2014.S166.g02895.01.t
ATGGCGCGCGAGCACATAAACAAAACAAACATGGCCTCGCGCATGGAAGCTCCACCTGGC
TTCAAAAGTTTGGTTATAAAATTCGATAAAACGTGCAAATTCGGACACACGCTTTTCTTT
AAACCGAACCAAACTAGAACTGAAGATACGTCTAAACCTAAACTCCGTACTTTATTAGTG
TTGAACGTTCCGCCGTACTGCAATAAAGAAAGTTTGAATCGTATTTTTTCGCTGAAGTTC
GGGGATGTCGAAAACGTAATTTTACAGAAAAAAATTGCCAACGACGCTACAGAATTCGTT
CAGAAACCTACGGTGACGGATTTATCGCTCGATGACGAGAAATATTTCAAATCCGAGGAC
ATTAAGGGATTCAAATTGGCGTTTATTATATTTTCGGACACTGCATCAGTAACCAGGGCA
GCTGAATACGAAACGAATGAAAAACCATGCATCATTTCTACAAGAGCTTGCCCGGTTAAA
GTAGGAATGGGAAAATGGATCAAGGAATATTGCGATTCGATACCAGACAAAAACCTACAG
GTTAACATCGACCTTTACATGTCGAAATATGACACAGCCCTCACCAGGGCAGAAGCAAAA
GAAGAAGAGACCAAAGATGCTCCTGACGAGGAGGGTTGGATCAAGGTGAGCAGGAAAGGC
AAACATCCAGTTGTCCCCAGGACAGAAGCGAATGAACTTAAGGCAAAAGCGCGAGAAAAA
ATGAAAAGGAAACAAAAAGAACTTATTAACGTATATGCGTATCAGATTAGAGAGTCGAAG
CGGGAAAAGATCGCTGAACTGCGAAGGAAATTCGAGGAAGACAAAGTACGAATTCAATCG
ATGAGACAGTCACGCAAATTTCAACCTTTCTAG

InterProScan

PANTHER	RRP7 (IPR024326) - T[9-290] 1.1E-61
SUPERFAMILY	RBD_domain_sf (IPR035979) - T[46-91] 1.26E-6 - T[125-147] 1.26E-6
ProSiteProfiles	RRM_dom (IPR000504) - T[56-166] 8.569
Pfam	RRP7 (IPR024326) - T[162-290] 4.3E-32

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RRP7A_HUMAN	41.935 %	202	3.5E-64
RRP7B_HUMAN	55.769 %	108	5.83E-30