- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1541.g08525.02.t
Possible name(s)
DDX27; DDX47; DDX54
Gene model
Location
S1541 [6,403 / 8,683]
Amino acid sequence
Length: 760
>Haaura.CG.MTP2014.S1541.g08525.02.p
MSDLIPTIKDGDNIQIFEEDSESEDETGQVFTKEMRKRKKAEEKGFNSNFVFDTDNNTEE
ITWSLDCALEMARVKQSNQSSVDHKIAEVRRNRLIKKAHFTPDCPDSTVVEVEASDDDEE
QSMLVADKVKTKEVKLKKNTKHKNDEEFDDEIRKTIADKKAALISEKDDSDEEFFINCPK
WNPKLGFQDMNLSRPLLKGISVLNYVTPTPIQQAAIPVALMGKDICACAATGTGKTAAFM
LPVLERLVYKPRVAPVTRILCLVPTRELAVQVHSITRQLAQFTDIQVCLAAGGLDRKSQE
AALRHGPDIIVGTPGRVIDHLQNAPSFQIKTVEILILDEADRMLDEFFEDQMNEIINLCS
PNHQTMLFSATMTDQVKDLAAVSLNNPTKIFINSNTEVAPFLRQEFIRIRPNKEGDREAI
VCALCSRTFVSNVLIFTQTKKQAHRMHIVMGLLGLKVGELHGDLNQAQRLESLQKFKNGE
IDILVCTDIAARGLDINNVKTVINFTMPNTVKHYIHRVGRTARAGKVGRSVSLVGETERK
MLKDIVKQARNPVKSRIVPPGVIEKFKSRLEEQDDEIDEVIKMEVSEKELIKSENQISKG
QKLLEKKTGKQCYEPQKRMWFQSHSDRENRKATLLLGFHSEVKGKKLKKGKKSTFVTRPR
NAEERAALELEKVKAYQLREAKRNRKPKRARACAENNTDRTSKRPKLKNKSSFESELTNT
GRHSVKKFRSGPNYQDRMAMGLGPKGKQRKSSKKPGGRR*
Nucleotide sequence
Length: 2,280
>Haaura.CG.MTP2014.S1541.g08525.02.t
ATGTCAGATTTGATACCAACAATTAAGGATGGAGATAATATCCAAATATTTGAGGAAGAC
AGTGAAAGCGAAGATGAAACTGGTCAGGTATTCACGAAGGAGATGAGAAAACGTAAGAAA
GCTGAAGAAAAGGGATTCAATTCGAACTTTGTCTTTGATACGGATAATAACACTGAGGAA
ATAACTTGGTCCCTCGATTGTGCACTTGAAATGGCTAGAGTTAAACAGAGCAATCAGTCA
TCTGTGGATCACAAAATTGCTGAAGTGCGCAGAAATCGATTGATAAAGAAAGCTCATTTC
ACTCCAGATTGTCCTGATAGTACTGTGGTGGAAGTAGAAGCCAGTGATGATGATGAAGAA
CAGTCGATGTTGGTTGCGGACAAAGTGAAAACTAAAGAAGTTAAACTTAAAAAAAATACC
AAACATAAAAATGATGAGGAATTCGATGACGAGATACGCAAGACCATTGCTGACAAAAAA
GCAGCTTTGATTTCCGAGAAAGATGATAGTGATGAAGAATTTTTCATCAACTGCCCGAAA
TGGAATCCGAAATTGGGTTTTCAGGACATGAATTTATCCAGACCCCTTTTGAAAGGTATC
AGCGTGTTGAATTATGTCACCCCTACACCCATACAACAGGCGGCAATACCGGTCGCCTTA
ATGGGTAAAGACATATGCGCGTGCGCTGCGACAGGCACTGGAAAAACAGCTGCTTTTATG
TTACCGGTCCTCGAAAGACTTGTATACAAGCCACGAGTTGCCCCCGTGACAAGAATTCTT
TGTCTGGTCCCCACTCGTGAACTGGCTGTGCAAGTGCATTCTATAACAAGACAGTTGGCT
CAATTCACAGATATTCAAGTTTGCTTAGCTGCCGGTGGTCTAGACAGGAAATCCCAGGAA
GCAGCCTTGCGGCACGGACCAGATATTATAGTTGGAACTCCCGGAAGAGTAATTGATCAT
TTACAGAACGCCCCTTCCTTTCAGATAAAGACTGTTGAAATTCTCATTCTGGATGAAGCG
GACAGAATGCTTGATGAATTTTTCGAGGACCAGATGAACGAAATAATTAATCTATGCTCT
CCTAACCACCAAACCATGCTCTTTTCTGCTACAATGACAGACCAGGTGAAGGATTTGGCA
GCCGTTTCATTGAACAACCCCACCAAAATATTCATAAACAGCAATACAGAAGTTGCGCCG
TTTCTGCGCCAGGAATTTATTCGTATACGACCCAATAAGGAGGGCGACAGAGAGGCGATC
GTATGTGCCCTGTGTTCTCGTACTTTTGTGTCGAACGTGCTTATTTTCACTCAGACCAAA
AAGCAGGCTCACCGAATGCACATTGTTATGGGATTGCTGGGGTTGAAGGTAGGCGAATTG
CACGGGGACTTGAATCAAGCTCAGAGGCTCGAAAGTTTGCAGAAATTTAAAAATGGTGAA
ATTGATATCTTGGTTTGCACTGACATAGCTGCTAGGGGTTTGGATATAAACAATGTGAAA
ACCGTCATCAATTTTACTATGCCAAACACCGTCAAGCATTACATCCATCGGGTGGGAAGA
ACGGCCAGAGCGGGCAAGGTTGGTCGGTCTGTGTCGCTTGTAGGGGAAACCGAAAGAAAA
ATGCTCAAAGATATTGTCAAACAAGCGAGAAACCCAGTTAAGAGCAGAATCGTTCCTCCA
GGCGTCATAGAGAAATTTAAAAGCAGGCTAGAAGAACAAGATGATGAGATTGATGAAGTG
ATCAAAATGGAAGTTTCAGAGAAAGAGTTAATCAAATCGGAAAATCAGATTTCGAAGGGA
CAAAAACTGCTGGAGAAAAAAACTGGAAAGCAATGCTACGAACCGCAGAAAAGAATGTGG
TTTCAGTCGCACTCTGATCGAGAGAACAGGAAAGCCACCCTGCTTCTCGGCTTTCACTCG
GAGGTCAAAGGGAAGAAGTTGAAGAAGGGCAAAAAATCCACATTTGTGACACGTCCCAGG
AATGCTGAAGAGCGAGCTGCCCTTGAATTGGAAAAGGTCAAAGCGTATCAACTGCGGGAA
GCCAAACGAAACAGGAAACCAAAGCGCGCTCGAGCTTGTGCTGAAAACAATACTGATAGG
ACGTCGAAAAGGCCGAAGCTGAAAAACAAATCTTCGTTTGAGTCTGAACTTACAAACACT
GGTAGGCATTCGGTAAAGAAATTCAGGTCTGGGCCAAATTATCAGGACCGTATGGCAATG
GGTTTAGGACCCAAAGGAAAACAGAGAAAATCTTCTAAGAAACCAGGTGGAAGAAGATGA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[185-213] 10.905 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[204-405] 2.1E-56 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[209-379] 1.3E-47 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[216-390] 30.006 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[258-546] 5.89E-67 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[336-344] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[401-566] 20.752 |
| CDD |
Helicase_C (IPR001650) - T[406-533] 1.20038E-33 |
| Pfam |
Helicase_C (IPR001650) - T[420-525] 7.3E-30 |
| SMART |
Helicase_C (IPR001650) - T[444-525] 1.2E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 53.857 % | 712 | 0 |
| DDX47_HUMAN | 39.669 % | 261 | 4.19E-79 |
| DDX54_HUMAN | 39.118 % | 248 | 1.08E-70 |
