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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S14.g00419.01.t

Possible name(s)

TRAM1; TRAM1L1; TRAM2

Location

S14 [3,588 / 6,413]

Sequences

Amino acid sequence

Length: 375

>Haaura.CG.MTP2014.S14.g00419.01.p
MGMPRKKSKNPPVMSHEFVIQNHADIVSCTAIVVILGLIFETTAKISRLFIFLQYGIKQE
EEKTEDGDIIEKFPVNFERGWLDAFTVVFQAMIIIVVHAVIQEYIIDKVSKKLHLSKTKT
SKFNESGQLAIWSVVSACWAAYRVHRNGLIPDISKIWEEYPHNSLYWEDKLFMTVQLAYW
LHMFPEIYLQKIRKEEIRHRIQYYSLYFGFILCAYFLHFWRFATVVLAFHYSVECIFHLA
RMFHFAEKTEQAQIGFNAWGILYPLIRFIVLSLTIVVFVFGLGKIDQQGFDPASGNYNTS
LIRNLSMGVMCMLQLWLMWLYIQLQFKHRRNQQQFQQKKKNVGAKPKNTKKSQKKQADAE
VDDNSVSNGKLKRS*

Nucleotide sequence

Length: 1,125

>Haaura.CG.MTP2014.S14.g00419.01.t
ATGGGAATGCCAAGAAAAAAGAGCAAGAACCCACCAGTGATGAGCCATGAGTTTGTGATC
CAAAATCATGCAGACATCGTATCATGCACGGCAATTGTTGTTATTCTTGGTCTCATATTT
GAGACCACAGCAAAGATCAGCAGGCTGTTCATTTTCCTTCAATATGGCATTAAACAGGAA
GAAGAGAAAACAGAGGATGGAGATATTATCGAAAAGTTTCCTGTCAATTTCGAAAGGGGA
TGGCTAGATGCATTTACTGTTGTGTTTCAAGCAATGATCATCATAGTCGTCCATGCTGTC
ATCCAAGAATACATTATTGATAAAGTGTCAAAAAAACTTCACCTGTCGAAGACCAAGACC
AGCAAGTTTAACGAATCAGGTCAGCTGGCCATTTGGTCAGTTGTGTCTGCTTGCTGGGCT
GCTTACCGTGTACATCGGAATGGATTGATACCGGATATATCTAAGATCTGGGAAGAATAT
CCCCACAATAGTCTCTACTGGGAAGACAAACTCTTTATGACTGTTCAGCTTGCTTACTGG
CTACACATGTTCCCTGAAATATATCTCCAGAAGATAAGAAAAGAGGAAATACGACACAGG
ATTCAATATTACAGCCTTTACTTTGGATTCATCCTTTGCGCTTACTTCTTGCACTTCTGG
AGGTTTGCCACTGTGGTTCTTGCCTTCCACTACTCGGTCGAATGCATTTTCCATTTGGCG
AGAATGTTTCACTTCGCAGAGAAAACCGAACAAGCGCAGATTGGATTCAACGCTTGGGGA
ATTTTGTACCCGTTGATACGTTTCATCGTTCTCTCGCTGACTATTGTAGTCTTTGTGTTT
GGATTAGGCAAGATTGACCAACAAGGGTTTGATCCTGCTTCTGGCAATTATAACACTAGT
CTAATAAGAAACCTATCCATGGGTGTTATGTGTATGTTGCAACTCTGGCTAATGTGGCTC
TACATTCAGCTCCAATTCAAACACAGAAGGAACCAACAGCAATTTCAGCAGAAAAAGAAA
AACGTCGGGGCAAAACCAAAGAATACAAAGAAAAGCCAAAAGAAGCAAGCCGATGCAGAG
GTTGATGACAACAGTGTAAGCAATGGCAAACTGAAGCGAAGCTAA

InterProScan

PIRSF
Translocation_assoc_membrane (IPR016447) - T[1-374] 2.4E-137
Pfam
TRAM1 (IPR013599) - T[49-119] 6.0E-13
SMART
TLC-dom (IPR006634) - T[121-332] 1.5E-18
Pfam
TLC-dom (IPR006634) - T[122-322] 1.5E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRAM1_HUMAN 39.05 % 281 2.19E-92
TRAM2_HUMAN 40.751 % 283 2.13E-93
TR1L1_HUMAN 34.862 % 207 9.94E-64