- Region 'REG00000515' >
- Transcript 'Boleac.CG.SB_v3.S73....' >
- Region 'REG00000895' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1490.g08430.01.t
Possible name(s)
CSMD1; CUBN; TLL1
Gene model
Location
S1490 [9,308 / 13,156]
Amino acid sequence
Length: 1,054
>Haaura.CG.MTP2014.S1490.g08430.01.p
MHNLMLCLCALLMALILPKSDASYHLLVANPDQPGTSKISDSTHNNRILPGIDDVLNDLV
EEPTSGDGVINTIENVKFLVKNTDPDTSAQMNLRDVIPGNAVLTGLVLNNEGYTYELTHE
LHREKSEVLRKYEDAVAGGYSSVFIGDVQPSKTLCDSCKYVDEGQKVSALINVAPSDVFS
VSLSFAVPSDYPADVHVTIELFQPASSIEGVIFSPNYPNAYPNRADVTWAIDLAEEDLAI
NATIIGFESEPDFDNLTIYDGLQPTDPVLLDVSGYPDTGISVQSTGPDMYIAFTSDASVN
NGGFALKFASITVPEITTTTAVTVSTTPSPPVEPDTSSCTTIYLNNTDCDISKTTVGEQY
TISADTGSILSPGYPAGYSVSSFFTWRIQTTGSVVYIKVIDVDVAPSGEYVSIMNPSNAN
WQKVIKTDDLFVLMETSEVIVTFQSGPMSVGSRKRRGFYLSFWSYTPNEIDLQEYDSSWR
SISSPNYPSVYDNKDDMTWTIRAPEMYSIEMEITDINLEEFYDFLYLYQVNETKSGELLA
KLSGVNGGGYKYYTEKNVAFVHFVTDYTTTKAGFQLRYKLASHYCSEYMNNINSTNGIFK
NPDYPYYTASNRSCQWLIRVHPSKVIRFWVASYDTDHNSYVRFYDGSNTGVTQLTYFYRT
TNLNFISSNNEVLIVVERSSYEYDNRAYLMTYTAVNREDAYCTKQHTLTDSSGIITSPSY
PTRYPPSSHCQWSIELEPASKIVVEFEFFDVYNNDILTFYDGGTIFDTVLRSCGSCGADD
YIVTTGNQMLVSFTTASQNSDYGFKLYYYKESQMCANQVMTITNDAGIVMSPNYPGYYPN
NVRCVFNISVTPGNVIHYYFDYFYTYSPDSLVIYDGGTTNASVLVTLTSSHSGYTGVSSG
NQITMVFTTDSVTQRAGFHMTYSTKSDSTLPPDHTYSYLPVTKEHNTYDPLILLSPGFPD
PYPNEIDLVWYLEANEPGNYFRFEVIHSDIDHSDFLGFYNQLGTNPLSLQRIYYTNTYYV
TNAFSISSSVVTIWFHSGPKITGQGFYLEYYFY*
Nucleotide sequence
Length: 3,162
>Haaura.CG.MTP2014.S1490.g08430.01.t
ATGCATAATCTTATGCTGTGCTTATGTGCCCTGTTGATGGCACTTATTCTGCCTAAATCT
GACGCTTCATACCATCTGCTAGTTGCCAATCCAGACCAACCTGGAACTTCAAAGATCTCA
GACTCAACGCACAACAATCGAATTCTTCCAGGCATCGACGACGTACTAAACGATCTCGTG
GAAGAACCGACCAGTGGCGATGGCGTAATCAACACGATTGAGAATGTAAAATTCTTGGTG
AAAAACACGGACCCAGACACGTCAGCGCAAATGAACTTACGTGATGTCATACCAGGTAAC
GCTGTTCTAACCGGGTTAGTTCTCAATAACGAAGGCTACACGTACGAATTGACTCACGAA
CTTCATCGGGAAAAATCGGAGGTTTTGCGGAAATACGAGGACGCGGTCGCCGGCGGATAC
AGCTCGGTTTTTATCGGGGACGTGCAGCCGTCAAAAACCCTATGCGATAGCTGTAAATAC
GTGGATGAAGGTCAAAAAGTTAGCGCTCTTATTAACGTGGCACCGAGCGACGTGTTTTCC
GTTTCGTTATCGTTCGCTGTACCCTCTGACTACCCCGCCGATGTACACGTGACTATAGAA
CTCTTTCAACCGGCTAGTAGCATAGAAGGGGTTATATTTTCACCCAATTACCCCAACGCC
TACCCAAACAGAGCTGATGTCACTTGGGCAATTGATTTGGCCGAAGAAGACCTTGCTATA
AACGCAACGATCATTGGATTCGAGTCTGAACCTGATTTTGATAACTTGACCATATACGAC
GGCCTTCAGCCCACTGATCCCGTTCTACTCGACGTATCGGGTTATCCAGATACTGGGATT
TCTGTTCAATCAACCGGTCCCGACATGTACATTGCTTTTACATCTGATGCGTCAGTTAAT
AACGGAGGATTCGCTTTGAAATTTGCATCCATAACAGTACCAGAAATAACAACTACAACA
GCAGTTACTGTGTCGACCACACCTTCTCCCCCGGTAGAACCAGATACTTCATCGTGCACG
ACTATCTATCTTAACAATACGGACTGCGATATATCTAAGACAACGGTAGGGGAACAATAT
ACTATTTCGGCTGATACCGGTTCCATACTGAGTCCAGGCTATCCAGCTGGTTATTCAGTC
AGCTCCTTTTTCACATGGCGGATTCAGACAACAGGTTCGGTGGTTTATATTAAGGTAATT
GATGTAGACGTGGCTCCTTCCGGCGAATACGTAAGCATAATGAATCCGTCTAACGCAAAC
TGGCAAAAAGTTATCAAAACCGACGACCTGTTCGTTCTCATGGAAACCAGCGAAGTCATT
GTGACGTTTCAATCTGGACCGATGAGCGTTGGTTCCAGGAAACGTCGTGGGTTCTATTTG
AGTTTCTGGTCTTATACACCGAACGAAATTGATCTACAGGAATACGACTCTTCGTGGCGG
TCCATTTCTTCGCCGAATTATCCGTCTGTTTACGACAATAAAGATGATATGACATGGACG
ATAAGAGCGCCCGAAATGTACAGCATTGAAATGGAAATTACCGACATAAACCTGGAAGAA
TTCTACGACTTTCTTTACTTGTACCAAGTGAACGAAACTAAAAGCGGAGAACTACTCGCT
AAGCTGTCTGGCGTAAACGGGGGAGGTTACAAATATTATACGGAGAAAAATGTCGCCTTC
GTTCATTTCGTGACAGACTATACAACAACCAAAGCAGGTTTTCAACTTCGCTACAAACTG
GCTTCGCATTACTGTTCAGAATACATGAATAACATCAACTCAACGAATGGAATTTTCAAG
AATCCTGACTATCCTTACTACACAGCTTCTAACAGATCTTGTCAATGGCTTATCCGAGTT
CATCCATCAAAAGTTATTAGGTTTTGGGTTGCCAGTTACGACACCGACCATAACTCCTAC
GTACGATTCTATGATGGAAGTAACACAGGCGTTACACAGCTCACCTATTTCTACCGGACC
ACAAACCTTAACTTCATATCGAGCAATAACGAAGTACTTATAGTTGTCGAACGTAGCTCA
TATGAATACGATAACCGCGCCTATTTGATGACCTACACTGCTGTGAACAGGGAAGACGCC
TACTGTACAAAACAGCACACATTGACTGACAGCTCAGGTATTATTACGTCACCATCCTAC
CCGACAAGGTACCCTCCAAGCAGCCACTGTCAGTGGTCAATTGAACTGGAACCCGCATCC
AAGATCGTTGTTGAATTTGAATTTTTTGACGTATATAATAACGACATTCTGACTTTCTAC
GATGGGGGGACAATTTTCGACACCGTCCTACGAAGTTGCGGGAGCTGTGGTGCTGATGAT
TACATCGTGACAACCGGGAATCAAATGCTTGTTAGCTTCACTACAGCCTCCCAGAATTCA
GACTATGGCTTCAAACTCTACTATTACAAAGAGTCACAAATGTGTGCGAACCAAGTGATG
ACCATTACCAACGATGCTGGGATAGTTATGTCCCCAAATTACCCTGGGTATTACCCGAAC
AACGTCAGATGCGTTTTCAATATCTCCGTCACCCCTGGAAACGTGATTCATTACTATTTC
GATTACTTTTACACCTATTCCCCAGATTCGCTCGTAATCTACGATGGGGGCACTACTAAT
GCGAGTGTCCTGGTGACTTTGACCAGTTCCCATTCAGGATACACCGGTGTGTCATCTGGA
AACCAGATAACTATGGTATTTACAACCGATTCAGTTACGCAGCGCGCTGGATTCCATATG
ACCTACTCTACAAAAAGCGACTCTACTTTACCCCCCGATCACACCTATTCCTATCTCCCC
GTTACCAAGGAACATAACACATACGACCCCCTAATCCTGTTGTCTCCGGGTTTCCCTGAC
CCCTACCCCAATGAAATCGATCTTGTTTGGTATTTGGAAGCCAATGAGCCCGGAAATTAT
TTCCGATTCGAAGTCATTCATTCCGACATCGACCACAGTGACTTTCTTGGATTCTACAAT
CAATTGGGAACAAATCCCCTCAGTTTACAAAGGATCTATTACACCAACACATACTACGTG
ACGAATGCCTTCTCCATTAGCAGTTCTGTAGTGACAATTTGGTTTCATTCTGGGCCCAAG
ATTACAGGACAAGGATTCTATTTGGAATATTATTTCTATTAA
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[184-313] 2.7E-17 - T[357-464] 6.3E-7 - T[472-581] 6.8E-20 - T[587-698] 3.8E-11 - T[704-815] 1.7E-22 - T[819-928] 5.4E-23 - T[943-1053] 9.4E-11 |
| SMART |
CUB_dom (IPR000859) - T[197-311] 3.6E-11 - T[356-465] 0.0053 - T[470-581] 1.7E-21 - T[585-695] 3.9E-4 - T[702-811] 3.0E-23 - T[815-925] 4.3E-19 - T[942-1053] 0.0025 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[197-311] 13.039 - T[482-581] 11.923 - T[585-695] 10.962 - T[702-811] 19.551 - T[815-925] 14.847 |
| CDD |
CUB_dom (IPR000859) - T[206-310] 4.49193E-16 - T[475-578] 4.03783E-18 - T[592-694] 3.55507E-10 - T[709-809] 3.81212E-20 - T[827-924] 7.47475E-24 - T[952-1052] 6.06524E-10 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[207-310] 7.72E-20 - T[360-464] 6.41E-9 - T[477-579] 8.9E-20 - T[593-696] 5.76E-15 - T[708-809] 3.4E-23 - T[822-924] 2.09E-24 - T[952-1052] 2.62E-13 |
| Pfam |
CUB_dom (IPR000859) - T[209-308] 6.2E-11 - T[478-578] 1.0E-14 - T[592-692] 2.4E-6 - T[702-808] 3.9E-19 - T[822-922] 3.2E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CUBN_HUMAN | 23.558 % | 163 | 1.92E-40 |
| CDCP2_HUMAN | 26.705 % | 108 | 6.72E-25 |
| TLL1_HUMAN | 21.994 % | 124 | 1.1E-28 |