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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1472.g08394.02.t

Possible name(s)

PRPF40B; WAC

Gene model

Haaura.CG.MTP2014.S1472.g08394

Location

S1472 [8,802 / 13,393]

Sequences

Amino acid sequence

Length: 527

>Haaura.CG.MTP2014.S1472.g08394.02.p
MHEMRKSETVQHHHPRHVDGRREIEKYGMHKMNEHHKSSNSSQINKSERDHRATKSHSVT
SQIPGAIRICGDWSEHISSNGKVYFFHNKTKVSQWERPTEWSSRAINCCNMVDPDHVIVI
IWKRSVYCLICNTKHPSNGSIPSSGQQSRQQHKGYPQVSDVKKIQQQHNRHRPNHEGEGS
KDRDYRTLSANSSAKDRDYRDVDYRDAVASSRTNDGKVSNSGESRLQQRLDRDYRSSSNS
TQDRTSNKISMNSLRHKSQSPVTKDGKIIQTGYDSLQRHNRDNFKNLNSNHTANENSRHS
HDGTDHSTTPKSMSDAQKSGRQAVPRGCEAANDNDDSSTSALVQTLSNVLSQASTSSDKN
STDSSIEGNLKNALQMLIDVAVRNQHITGNSGEKESPEAETGQEEPATKRLKISSDPVDE
YLRNTIAASQKSESSLNFLRSSFDDRLSKHVQGWPMDHIEKQSNRLSDECHRLTVNHTSQ
ICASMKIARSQVRAAEIHSTVQEQRILYLRQQIKDLEKSTTMAPYT*

Nucleotide sequence

Length: 1,581

>Haaura.CG.MTP2014.S1472.g08394.02.t
ATGCATGAGATGCGTAAGTCCGAAACAGTCCAGCACCATCACCCTCGTCACGTTGATGGA
AGGCGTGAGATAGAAAAATATGGAATGCATAAAATGAATGAACATCACAAATCCTCCAAT
TCATCACAAATCAACAAATCTGAACGAGATCACAGGGCAACAAAATCACATAGTGTCACA
TCACAGATCCCCGGTGCAATACGAATATGTGGTGATTGGTCGGAACACATAAGTTCTAAT
GGCAAGGTCTATTTTTTTCACAACAAAACAAAAGTTTCACAATGGGAAAGACCAACTGAA
TGGAGCAGCAGAGCTATAAACTGTTGCAATATGGTAGACCCTGATCATGTAATAGTAATT
ATTTGGAAAAGATCTGTCTATTGTTTGATTTGCAATACAAAACATCCCAGCAACGGATCT
ATCCCATCCAGTGGTCAGCAGTCTCGCCAACAGCATAAAGGCTACCCGCAGGTTTCAGAC
GTGAAAAAGATCCAGCAACAACATAACCGGCATCGTCCCAATCATGAGGGAGAAGGAAGC
AAAGACCGAGATTATAGAACTCTTTCTGCAAACAGTAGCGCGAAAGATCGCGATTACAGA
GATGTAGATTACAGAGACGCCGTCGCCTCTTCGCGAACCAACGATGGAAAAGTTTCTAAC
AGTGGCGAATCTCGGTTGCAGCAACGGCTAGACAGAGACTACAGATCGTCTTCTAACTCG
ACGCAAGATAGAACGTCGAATAAAATCAGTATGAACTCGCTCAGACATAAGAGTCAATCT
CCAGTCACTAAAGATGGTAAAATTATTCAAACCGGTTATGACAGTTTGCAAAGACATAAT
CGTGATAATTTCAAAAACTTAAATTCTAATCATACTGCCAATGAAAATTCACGCCATTCG
CATGATGGCACGGACCACAGCACCACTCCGAAGTCGATGTCTGATGCCCAAAAAAGTGGT
AGACAAGCTGTACCAAGAGGTTGTGAGGCAGCCAACGATAATGATGATTCTTCTACCTCT
GCATTAGTGCAAACTCTCTCAAATGTACTCAGTCAAGCCAGCACCTCAAGTGACAAAAAC
TCGACCGACTCTTCGATCGAGGGAAACTTGAAGAATGCACTGCAAATGCTGATTGATGTT
GCTGTCCGAAACCAGCATATAACAGGTAATTCTGGAGAAAAGGAATCACCTGAAGCTGAG
ACCGGTCAGGAGGAACCAGCAACAAAACGTTTGAAAATTTCTAGCGATCCTGTTGATGAA
TATTTAAGAAATACAATAGCAGCTTCACAGAAGTCAGAAAGTTCGTTAAATTTTCTTCGC
AGTTCGTTTGATGACAGACTGAGTAAGCACGTCCAGGGCTGGCCTATGGATCATATTGAA
AAACAGTCAAATCGATTAAGTGATGAATGTCATCGCTTAACTGTGAATCACACGTCGCAG
ATTTGCGCATCAATGAAAATCGCCAGGTCACAAGTACGAGCGGCAGAAATTCATTCCACA
GTTCAAGAACAAAGGATATTATATTTACGTCAACAAATCAAAGATCTTGAGAAATCGACC
ACAATGGCACCTTATACTTGA

InterProScan

SMART
WW_dom (IPR001202) - T[68-100] 1.3E-5
CDD
WW_dom (IPR001202) - T[71-100] 2.11578E-9
SUPERFAMILY
WW_dom_sf (IPR036020) - T[72-102] 1.1E-8
Pfam
WW_dom (IPR001202) - T[72-98] 7.0E-9
ProSitePatterns
WW_dom (IPR001202) - T[73-98] .
ProSiteProfiles
WW_dom (IPR001202) - T[73-100] 12.236

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
WAC_HUMAN 56.25 % 101 9.47E-23