- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
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Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1456.g08363.01.t
Possible name(s)
WDR45; WDR45B; WIPI1
Gene model
Location
S1456 [6,413 / 7,442]
Amino acid sequence
Length: 343
>Haaura.CG.MTP2014.S1456.g08363.01.p
MAVNHLMFNQDKSCFSCAMDNGIRIYNVEPLVEKCRLETEVVGSVSKVIMLHRTNLLAII
GGGQKQRFASNTVLVWDDRKKVLVSEYRFSHDVLNVRLRRDKLVAVLQKRVYVFNFPNDS
KKILEVDTKRNPLGLCELCTSSEKQLMAVPGHKVGSLQLIDLSAADSGDSASPVNINAHQ
GELACIAINHQGTLVATASEKGTLIRLFDIQTRQKLVELRRGTDQAMVYCINFSNDSSFL
CASSDKGTVHIFALKDKALNRRSAFAKAGKVGLINPYISSQWSLANFTVPAECACVCAFS
GSNSVVALCMDGTFHKYLFTADGTCNREAYDIYLEVGDEVDF*
Nucleotide sequence
Length: 1,029
>Haaura.CG.MTP2014.S1456.g08363.01.t
ATGGCTGTGAACCACCTCATGTTTAACCAAGATAAATCTTGCTTCAGTTGTGCAATGGAC
AACGGAATTCGAATTTACAATGTTGAACCGCTGGTGGAAAAATGTCGTTTGGAAACCGAA
GTTGTTGGAAGTGTTTCGAAAGTTATCATGCTTCATCGCACAAATTTACTCGCAATTATC
GGTGGAGGTCAAAAGCAACGATTTGCATCGAATACTGTCTTGGTATGGGACGATAGAAAG
AAAGTTCTTGTCAGCGAATACAGGTTTTCTCATGACGTATTAAACGTACGTTTGCGAAGA
GACAAACTTGTTGCTGTTCTACAAAAACGAGTCTACGTATTTAATTTTCCGAACGATTCG
AAAAAGATTTTGGAAGTTGATACAAAACGTAATCCTCTTGGACTTTGCGAGCTATGCACA
AGTTCAGAAAAACAACTGATGGCTGTACCCGGTCACAAAGTCGGTAGTTTACAATTAATT
GATCTCTCTGCTGCTGACAGTGGAGATTCTGCATCTCCTGTCAATATAAATGCGCATCAA
GGGGAACTCGCGTGCATTGCGATTAATCACCAAGGAACTCTTGTTGCCACGGCATCGGAG
AAAGGAACACTTATCAGATTGTTCGACATTCAAACGAGACAGAAGCTTGTTGAATTACGA
CGGGGGACAGATCAAGCGATGGTTTATTGCATAAATTTCAGTAATGATTCATCGTTCTTG
TGCGCCTCTAGTGACAAAGGGACAGTTCATATATTCGCGTTAAAGGACAAAGCGTTGAAC
CGTAGATCAGCCTTCGCAAAAGCAGGAAAAGTCGGTCTAATTAATCCGTACATTAGTTCA
CAGTGGAGTTTAGCTAATTTCACAGTACCTGCAGAATGTGCATGCGTCTGTGCTTTCTCC
GGTTCAAATTCGGTTGTTGCACTTTGTATGGACGGAACTTTTCATAAATATTTGTTCACA
GCAGACGGAACATGCAATCGTGAAGCTTATGATATTTATCTTGAAGTTGGTGATGAAGTT
GATTTCTAA
| PANTHER |
WIPI4 (IPR032910) - T[3-342] 7.9E-151 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[3-316] 1.98E-32 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[3-324] 3.0E-22 |
| SMART |
WD40_repeat (IPR001680) - T[170-209] 0.13 - T[212-253] 0.49 |
| Pfam |
WD40_repeat (IPR001680) - T[222-252] 0.0023 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WIPI3_HUMAN | 46.847 % | 322 | 1.99E-109 |
| WIPI4_HUMAN | 60.907 % | 461 | 6.79E-164 |
| WIPI1_HUMAN | 32.95 % | 118 | 5.09E-30 |