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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1439.g08336.01.t

Possible name(s)

SLCO4A1; SLCO4C1; SLCO5A1

Gene model

Haaura.CG.MTP2014.S1439.g08336

Location

S1439 [15,379 / 21,468]

Sequences

Amino acid sequence

Length: 668

>Haaura.CG.MTP2014.S1439.g08336.01.p
SSSSTSSCAMDLDSNENKQEKKRENETTALQTKQQKVEQTGAVPVTVSSITKDSCGYGAR
CHPRWLQFFDSAKWFLVFLCAYIFLRSSLNGGYLNSVLTTMGKRYGMRSADTRLIISSYD
IGSLLVVVFISYFGGKGHRPRWIGIGAVFVAIGAGLFSTPQSFSTPYEIPKVASTDNVHK
HLCLNQSMTNSSLNNTQCEAQVRVDDSGYLPIFVIANMLIGMGSVPIYSLGVTFIYDNVE
RHTSSMYIAFVYMVSAIGPPLGYVLGGIMLGYYVDPGVEGVPSSDPRFIGAWWSGFVLFG
ALILASAIPLFGYPQKLPQPHSQLCSGSSPVTDDNEEDMNDCMKCGKNLKDLQRASISIL
TNPTYLCVTAAGIIECSVASSAISLLSKYMPTEFSIDPFQSSILIYLGIVLLPRLAGGIL
IGGYVIKHFRLNKTECARFMMISIIVSLIMLFAGLFIHCPASDIMGIDESCMNCNCESTL
YNPICLKNVTFYNPCTAGCSDVLMHDNGTQIEPITYTGCDCDGLNITATPGICDRDCTHT
LIPIFACLFFVSMSMSCAIIPGIIVTLRCVKYDERTLAIGLQYALFKIFGNIPSNIYYQS
AIDKVCLIWVGSTDVCEGGSDVCQVYNADFFHYIYFGLSLGLKFGSAIFISIAWYLCRKK
DMRNHKTK

Nucleotide sequence

Length: 2,004

>Haaura.CG.MTP2014.S1439.g08336.01.t
TCTTCTTCATCTACATCTTCCTGTGCCATGGATTTAGATTCAAATGAAAACAAACAGGAG
AAGAAGAGGGAAAATGAAACCACCGCACTGCAGACGAAACAGCAAAAAGTTGAGCAAACT
GGTGCCGTTCCTGTAACCGTATCAAGTATTACAAAGGATTCGTGCGGATATGGGGCTCGT
TGTCACCCGCGTTGGCTTCAGTTTTTCGATTCTGCAAAATGGTTCCTCGTTTTCTTGTGT
GCGTATATTTTTTTGCGAAGTAGTCTCAATGGCGGATACCTAAACAGTGTTTTAACAACC
ATGGGAAAGAGGTATGGAATGAGAAGCGCTGACACCAGACTTATTATTTCAAGTTATGAT
ATCGGCAGTCTTCTTGTTGTTGTTTTCATTTCCTACTTCGGAGGCAAAGGGCACAGACCG
AGATGGATTGGAATCGGTGCTGTATTTGTGGCAATAGGAGCTGGATTGTTCTCAACACCT
CAGTCCTTCTCGACTCCCTACGAGATTCCAAAAGTTGCATCGACTGACAACGTGCACAAA
CATCTCTGTTTGAACCAGTCCATGACAAACAGCAGTTTGAATAACACACAATGTGAAGCA
CAGGTACGTGTGGATGATTCTGGTTACTTACCAATCTTTGTGATTGCCAACATGCTCATA
GGAATGGGTTCAGTTCCGATCTACTCACTCGGTGTTACCTTTATATACGACAATGTTGAG
CGACACACCTCATCGATGTATATCGCTTTTGTGTATATGGTGTCAGCAATTGGACCACCG
CTAGGATATGTTCTTGGCGGCATTATGCTTGGCTACTATGTTGACCCAGGTGTTGAAGGT
GTCCCATCCAGTGATCCGAGATTTATTGGAGCTTGGTGGTCCGGTTTTGTTCTATTCGGT
GCTCTGATTTTGGCTTCAGCTATTCCACTTTTTGGATACCCGCAGAAGCTTCCGCAACCT
CATTCTCAACTATGCAGTGGTTCATCCCCTGTTACTGATGATAATGAGGAAGATATGAAT
GACTGTATGAAATGTGGGAAAAATCTCAAAGATTTACAGCGTGCTTCCATATCAATCCTC
ACCAACCCGACCTATCTTTGCGTTACAGCAGCAGGAATAATAGAATGTTCCGTCGCCTCC
TCAGCCATTTCGCTCTTGTCAAAATATATGCCGACTGAGTTTAGCATTGACCCATTTCAA
TCTAGTATTTTAATTTATTTGGGAATTGTTCTGCTCCCAAGATTAGCTGGAGGTATTTTG
ATCGGTGGATACGTCATCAAACATTTCCGACTTAACAAAACCGAATGCGCAAGATTTATG
ATGATAAGCATCATTGTCTCTCTTATTATGCTTTTTGCAGGTCTATTTATCCACTGTCCT
GCATCCGATATTATGGGGATCGATGAGTCGTGCATGAATTGCAACTGCGAATCAACTTTA
TACAACCCGATCTGTCTCAAGAATGTTACTTTTTATAATCCATGCACAGCTGGATGTTCT
GATGTATTGATGCATGATAATGGAACGCAAATCGAACCAATCACATACACAGGCTGCGAT
TGCGATGGACTCAACATAACAGCAACCCCGGGGATTTGTGATCGAGATTGCACGCATACG
CTCATACCAATATTTGCGTGCTTGTTCTTTGTTAGCATGAGTATGAGCTGTGCAATAATT
CCAGGAATAATAGTTACATTACGATGCGTCAAATATGATGAAAGAACGTTAGCGATAGGA
TTGCAGTATGCGCTGTTTAAAATATTCGGCAATATCCCTTCCAATATCTACTATCAATCA
GCAATTGATAAAGTATGTCTTATATGGGTTGGTTCAACAGATGTATGTGAAGGTGGATCT
GATGTATGTCAGGTATACAATGCGGATTTCTTCCATTACATTTACTTCGGTCTTTCGTTA
GGGCTGAAATTTGGCTCTGCTATTTTCATATCCATCGCATGGTATCTGTGTCGAAAAAAA
GACATGCGTAATCACAAGACAAAA

InterProScan

PANTHER
OATP (IPR004156) - T[52-666] 2.6E-167
TIGRFAM
OATP (IPR004156) - T[53-659] 7.7E-123
SUPERFAMILY
MFS_trans_sf (IPR036259) - T[64-165] 2.49E-26 - T[213-461] 2.49E-26 - T[539-592] 2.49E-26
Pfam
OATP (IPR004156) - T[74-630] 2.5E-141
CDD
MFS_dom (IPR020846) - T[77-317] 6.15665E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SO4A1_HUMAN 29.531 % 273 8.47E-82
SO4C1_HUMAN 28.632 % 276 8.78E-83
SO5A1_HUMAN 35.464 % 355 1.01E-111