- Clone 'AHC0AAA222YA19' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1405.g08276.02.t
Possible name(s)
KHDRBS2; QKI; SF1
Gene model
Location
S1405 [13,234 / 17,310]
Amino acid sequence
Length: 513
>Haaura.CG.MTP2014.S1405.g08276.02.p
MMRLNENYKAPMDYKPPVQRISEQIVIPSDLNPSINFVGLLIGPRGNTLKKIEKESQCKI
MIRGKGSVKEGKIGRKDGMPLPGEDEPLHALVTGMTIESVQKAVKEIHAIIKQGIEQPEG
QNDLRKLQLMELARLNGTLRDDALPREREWLKPENQNITNTTVCTKCGGRGHLVQDCLSQ
APSVGLQQEANSADGEPVNEVDKAKMDSEYMSLMAELGEGPVSSGGNSAGNKDNSNQQFG
GDQFSGPRAPWMGQRGPGYGGPMGYNGPPGNYNSPNMMGGPNARHPPWMRGDNRGRGGNY
GPRGGGRGSGHQGYGYQGYPQGNMQWMGQYDGSMGYGNMDGSNMGMGGHMGNMMNPPPPP
PNSAPQQPPLPPGSSGAQSSNWQQQSWGANASDGDGQEPPGESKSTESSNNNEYEGGNGM
QNNQMGGYGNMMGYGMWGGMGNMNPGGMGQPPMPSGPGPVPPPPPSNGNDSGQSGNANQQ
WGGGNMEYNNMMGMGMMGFGMAPAPPPPPPST*
Nucleotide sequence
Length: 1,755
>Haaura.CG.MTP2014.S1405.g08276.02.t
AAAAATGATTTCAACAATACAGGTGGTTCGAAATTAAGTTAAAAAGATTATGGTGAATGT
TTATTTGCGACTGAAAATTCCCCATTCACATTATTGCCATGTCCATATAGTTCGTCTCCA
GAACCGATCTATAACAACGAGGGTAAGAGGTTGAACACGAGAGAATACAGAACCAGGAAG
AAACTAGAAGAGGATAGACATAAGCTTATCCAAGATATGATGAGATTAAATGAAAATTAC
AAAGCTCCGATGGACTACAAACCACCAGTTCAAAGAATTAGTGAACAGATCGTAATTCCA
TCGGATTTGAATCCAAGTATTAATTTTGTTGGATTGCTGATCGGACCAAGAGGAAATACT
TTGAAAAAAATAGAGAAAGAATCCCAATGTAAGATCATGATTCGAGGGAAAGGTTCTGTG
AAGGAAGGGAAGATAGGAAGAAAGGATGGAATGCCACTACCTGGCGAAGATGAACCATTA
CATGCTCTCGTTACTGGTATGACAATCGAGAGTGTCCAGAAGGCAGTGAAAGAAATTCAT
GCAATTATTAAACAAGGAATTGAGCAACCTGAAGGGCAAAATGATTTACGGAAATTGCAG
CTGATGGAATTGGCGAGACTTAATGGTACACTACGAGATGATGCTCTGCCAAGAGAACGT
GAATGGCTCAAACCCGAGAATCAAAATATCACTAACACCACCGTGTGTACAAAATGCGGA
GGACGTGGACATCTTGTTCAAGATTGCTTGTCGCAGGCTCCCAGCGTTGGTCTTCAACAG
GAAGCAAATTCTGCTGACGGTGAGCCTGTGAATGAAGTTGATAAAGCAAAGATGGACAGT
GAGTACATGTCACTCATGGCCGAACTCGGCGAAGGTCCAGTGTCATCTGGTGGAAACAGC
GCAGGAAATAAGGATAACAGCAATCAACAATTTGGTGGAGATCAGTTCAGTGGACCCAGG
GCTCCGTGGATGGGACAAAGAGGACCTGGATATGGAGGTCCCATGGGATACAATGGACCG
CCTGGAAATTATAATTCGCCGAATATGATGGGTGGCCCCAATGCAAGACACCCACCTTGG
ATGAGAGGAGATAATCGTGGTAGAGGGGGTAATTATGGTCCCAGAGGAGGAGGCAGGGGT
TCTGGACATCAAGGTTATGGTTATCAAGGATATCCACAAGGTAATATGCAATGGATGGGT
CAGTATGATGGCAGCATGGGTTATGGCAACATGGATGGATCTAACATGGGTATGGGTGGT
CACATGGGTAATATGATGAATCCTCCACCTCCGCCACCAAATTCCGCTCCACAACAGCCT
CCTCTTCCTCCTGGTTCGTCAGGTGCCCAGTCATCCAATTGGCAACAGCAGTCTTGGGGA
GCAAATGCTTCTGATGGAGATGGACAGGAACCTCCAGGAGAAAGTAAATCAACTGAGTCA
TCAAATAACAATGAATATGAAGGTGGCAACGGAATGCAGAATAACCAAATGGGAGGATAT
GGCAATATGATGGGTTACGGTATGTGGGGAGGAATGGGTAACATGAATCCAGGAGGCATG
GGTCAACCTCCGATGCCGTCAGGACCCGGTCCGGTTCCTCCTCCGCCACCAAGCAACGGG
AATGACTCCGGTCAGTCTGGAAACGCCAACCAGCAGTGGGGCGGCGGCAATATGGAATAT
AACAATATGATGGGTATGGGCATGATGGGGTTCGGAATGGCCCCTGCCCCTCCTCCACCA
CCCCCATCAACATGA
| PANTHER |
BBP/SF1 (IPR031150) - T[1-371] 6.7E-101 - T[353-509] 6.7E-101 |
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[2-145] 2.4E-46 |
| SMART |
KH_dom (IPR004087) - T[19-112] 6.5E-11 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[21-139] 6.23E-25 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[24-108] 8.5E-9 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[164-177] 9.109 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SF01_HUMAN | 62.771 % | 286 | 3.02E-89 |
| QKI_HUMAN | 39.394 % | 90.9 | 5.59E-20 |