- Transcript 'KH2012:KH.C6.257.v1....' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1405.g08276.01.t
Possible name(s)
KHDRBS2; QKI; SF1
Gene model
Location
S1405 [10,711 / 17,310]
Amino acid sequence
Length: 706
>Haaura.CG.MTP2014.S1405.g08276.01.p
MSRKSFTGANAVPLGPRNPAIGAKRTFSAEPPPAHYNQPSPFPIKQEENRVSSNAAAALR
AAQAAAANLAKLQKKVAEMTPIKQEEIPDEGRGRPRKKRSRWGTPEVKTNIPGIPAIIPA
NLTKDQQKAYIVQLQIEDLTRKLKSGDLGISPNPEDRSPSPEPIYNNEGKRLNTREYRTR
KKLEEDRHKLIQDMMRLNENYKAPMDYKPPVQRISEQIVIPSDLNPSINFVGLLIGPRGN
TLKKIEKESQCKIMIRGKGSVKEGKIGRKDGMPLPGEDEPLHALVTGMTIESVQKAVKEI
HAIIKQGIEQPEGQNDLRKLQLMELARLNGTLRDDALPREREWLKPENQNITNTTVCTKC
GGRGHLVQDCLSQAPSVGLQQEANSADGEPVNEVDKAKMDSEYMSLMAELGEGPVSSGGN
SAGNKDNSNQQFGGDQFSGPRAPWMGQRGPGYGGPMGYNGPPGNYNSPNMMGGPNARHPP
WMRGDNRGRGGNYGPRGGGRGSGHQGYGYQGYPQGNMQWMGQYDGSMGYGNMDGSNMGMG
GHMGNMMNPPPPPPNSAPQQPPLPPGSSGAQSSNWQQQSWGANASDGDGQEPPGESKSTE
SSNNNEYEGGNGMQNNQMGGYGNMMGYGMWGGMGNMNPGGMGQPPMPSGPGPVPPPPPSN
GNDSGQSGNANQQWGGGNMEYNNMMGMGMMGFGMAPAPPPPPPST*
Nucleotide sequence
Length: 2,118
>Haaura.CG.MTP2014.S1405.g08276.01.t
ATGTCGCGGAAGTCCTTCACTGGGGCGAACGCCGTTCCCCTCGGACCGCGAAATCCTGCT
ATAGGGGCCAAACGAACCTTTTCAGCCGAACCCCCACCGGCGCACTACAATCAACCTAGT
CCGTTTCCAATAAAACAAGAAGAAAATAGAGTGAGTTCGAATGCGGCAGCTGCCTTACGT
GCAGCTCAAGCAGCAGCTGCTAATTTGGCGAAACTACAGAAGAAAGTAGCAGAAATGACT
CCAATAAAACAAGAAGAAATCCCGGACGAGGGTCGCGGTCGTCCAAGAAAGAAACGAAGT
CGATGGGGCACGCCTGAAGTGAAGACCAATATCCCTGGAATTCCTGCGATCATTCCGGCT
AATTTGACAAAGGATCAGCAAAAAGCCTATATAGTGCAGCTCCAGATCGAAGATTTGACA
AGAAAATTGAAATCAGGCGACCTAGGCATCTCGCCCAACCCAGAAGACAGATCACCGTCT
CCAGAACCGATCTATAACAACGAGGGTAAGAGGTTGAACACGAGAGAATACAGAACCAGG
AAGAAACTAGAAGAGGATAGACATAAGCTTATCCAAGATATGATGAGATTAAATGAAAAT
TACAAAGCTCCGATGGACTACAAACCACCAGTTCAAAGAATTAGTGAACAGATCGTAATT
CCATCGGATTTGAATCCAAGTATTAATTTTGTTGGATTGCTGATCGGACCAAGAGGAAAT
ACTTTGAAAAAAATAGAGAAAGAATCCCAATGTAAGATCATGATTCGAGGGAAAGGTTCT
GTGAAGGAAGGGAAGATAGGAAGAAAGGATGGAATGCCACTACCTGGCGAAGATGAACCA
TTACATGCTCTCGTTACTGGTATGACAATCGAGAGTGTCCAGAAGGCAGTGAAAGAAATT
CATGCAATTATTAAACAAGGAATTGAGCAACCTGAAGGGCAAAATGATTTACGGAAATTG
CAGCTGATGGAATTGGCGAGACTTAATGGTACACTACGAGATGATGCTCTGCCAAGAGAA
CGTGAATGGCTCAAACCCGAGAATCAAAATATCACTAACACCACCGTGTGTACAAAATGC
GGAGGACGTGGACATCTTGTTCAAGATTGCTTGTCGCAGGCTCCCAGCGTTGGTCTTCAA
CAGGAAGCAAATTCTGCTGACGGTGAGCCTGTGAATGAAGTTGATAAAGCAAAGATGGAC
AGTGAGTACATGTCACTCATGGCCGAACTCGGCGAAGGTCCAGTGTCATCTGGTGGAAAC
AGCGCAGGAAATAAGGATAACAGCAATCAACAATTTGGTGGAGATCAGTTCAGTGGACCC
AGGGCTCCGTGGATGGGACAAAGAGGACCTGGATATGGAGGTCCCATGGGATACAATGGA
CCGCCTGGAAATTATAATTCGCCGAATATGATGGGTGGCCCCAATGCAAGACACCCACCT
TGGATGAGAGGAGATAATCGTGGTAGAGGGGGTAATTATGGTCCCAGAGGAGGAGGCAGG
GGTTCTGGACATCAAGGTTATGGTTATCAAGGATATCCACAAGGTAATATGCAATGGATG
GGTCAGTATGATGGCAGCATGGGTTATGGCAACATGGATGGATCTAACATGGGTATGGGT
GGTCACATGGGTAATATGATGAATCCTCCACCTCCGCCACCAAATTCCGCTCCACAACAG
CCTCCTCTTCCTCCTGGTTCGTCAGGTGCCCAGTCATCCAATTGGCAACAGCAGTCTTGG
GGAGCAAATGCTTCTGATGGAGATGGACAGGAACCTCCAGGAGAAAGTAAATCAACTGAG
TCATCAAATAACAATGAATATGAAGGTGGCAACGGAATGCAGAATAACCAAATGGGAGGA
TATGGCAATATGATGGGTTACGGTATGTGGGGAGGAATGGGTAACATGAATCCAGGAGGC
ATGGGTCAACCTCCGATGCCGTCAGGACCCGGTCCGGTTCCTCCTCCGCCACCAAGCAAC
GGGAATGACTCCGGTCAGTCTGGAAACGCCAACCAGCAGTGGGGCGGCGGCAATATGGAA
TATAACAATATGATGGGTATGGGCATGATGGGGTTCGGAATGGCCCCTGCCCCTCCTCCA
CCACCCCCATCAACATGA
| PANTHER |
BBP/SF1 (IPR031150) - T[44-564] 7.6E-149 - T[549-702] 7.6E-149 |
| Pfam |
SF1-HH (IPR032570) - T[99-208] 6.0E-40 |
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[153-338] 7.4E-52 |
| SMART |
KH_dom (IPR004087) - T[212-305] 6.5E-11 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[214-332] 1.05E-24 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[217-301] 1.3E-8 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[357-370] 9.109 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SF01_HUMAN | 66.163 % | 437 | 4.15E-145 |
| QKI_HUMAN | 35.165 % | 92 | 4.78E-20 |