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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1387.g08237.01.t

Possible name(s)

CNOT3

Gene model

Haaura.CG.MTP2014.S1387.g08237

Location

S1387 [495 / 2,757]

Sequences

Amino acid sequence

Length: 754

>Haaura.CG.MTP2014.S1387.g08237.01.p
GYKLGSMADKRKLQGEIDRCLKKVQEGVETFEDIWQKLHHAANTNQKEKYESDLKKEIKK
LQRLRDQIKTWAASNEIKDKRTLLDNRKLIETQMERFKVVERETKTKAYSKEGLGLAAKI
DPAQKEKEDTMQWLQLTIDNLNRQIDVFESQIESTTSHSRKKKIDGEKQKVVDELKSHLE
RHRYHIKNLETIMRMLDNGTIMCDRISEIRDEVEYYADACEDPDFEENEFLYEDLNLDEM
LPSVNAATSPVEKQLNSSISNTSSRGDEDEVRMNHDASASGSPIPNSGHSSSTSSHTSKE
DVSEVKTRNRSLTSEDILSPRKNSQSSIPSASLPKPNPPRINLPKLNQKPSVAPHSQAYA
TAASIQQSHSNNHQQPLPDSQPPSVIQTTAPPPLTTSPTKLPTAKQQQKSISEKSSWQSI
NSDVSSTESYSSIESQNALNILVSSVTSASANPNNTNGLSVSASQERTNLHKSILDAPKD
TVSVSKLVNILSSTSVTNTSPSILSNTSNMQNGIPTSFSDSTFTSLKSIAEKAVADAGLE
QEGINFSLAYTSPDPSNMIITTTQSRSELVSLNQQQQPGLMRQIPKGTGETRMAPLLGVA
PLGPLPLSKDNMYQQAMLEASWRHMPHPSDSERLRHYLPRNPCPTPMYYHQTPLPHHDSI
DFYLRLSTETLFFIFYYMEATKAQYLAARALKKQSWRFHTKYMMWFQRHEEPKTITDEYE
QGTYIYFDYEKWGQRKKEGFTFEYRYLEDRELQ*

Nucleotide sequence

Length: 2,262

>Haaura.CG.MTP2014.S1387.g08237.01.t
GGTTACAAACTAGGAAGTATGGCTGACAAGCGTAAACTGCAAGGCGAAATCGACAGATGT
CTTAAAAAGGTTCAGGAAGGTGTGGAAACGTTTGAAGATATTTGGCAGAAGCTTCACCAT
GCAGCCAACACGAATCAAAAAGAAAAATACGAAAGCGATCTGAAGAAAGAGATAAAGAAA
TTACAGAGGTTACGTGATCAAATCAAAACGTGGGCGGCATCTAATGAAATCAAAGACAAG
AGAACATTACTTGACAACAGAAAACTCATAGAAACCCAAATGGAGAGGTTTAAAGTCGTA
GAACGTGAGACGAAAACGAAAGCATATTCAAAAGAAGGTTTGGGGCTGGCGGCAAAGATA
GATCCTGCCCAGAAAGAAAAGGAAGACACTATGCAATGGCTCCAGCTAACGATCGACAAC
CTGAACAGACAGATCGACGTATTCGAAAGTCAGATAGAAAGTACAACGTCACATTCAAGA
AAAAAGAAAATCGACGGAGAGAAACAAAAAGTGGTTGATGAATTGAAGAGTCATTTGGAA
AGGCACAGATATCACATCAAAAATCTCGAGACCATCATGAGGATGCTGGATAATGGGACC
ATCATGTGCGACAGAATCTCGGAGATTCGAGACGAGGTGGAGTATTATGCCGACGCTTGC
GAAGATCCCGACTTTGAGGAAAACGAATTCCTCTATGAGGATTTGAATCTGGATGAAATG
CTTCCAAGTGTGAACGCGGCAACTTCACCGGTGGAGAAACAGCTCAATTCAAGCATAAGT
AACACCAGTTCAAGAGGAGACGAGGATGAAGTCAGAATGAACCACGACGCCAGTGCATCA
GGGTCACCCATTCCAAACAGTGGTCATTCATCATCTACTTCCAGTCATACCAGTAAAGAG
GATGTTAGCGAAGTCAAAACCAGAAATAGGTCTCTCACTTCCGAAGATATTTTGTCACCA
AGAAAGAATTCTCAGTCATCGATACCTTCTGCCAGTTTACCGAAACCAAATCCACCGAGA
ATTAATTTACCGAAATTGAATCAAAAACCCAGTGTTGCACCACATTCTCAAGCTTATGCG
ACAGCAGCAAGCATTCAGCAATCGCATTCTAACAATCACCAGCAGCCGTTGCCCGACTCT
CAACCCCCTTCGGTGATTCAAACAACAGCGCCACCACCTTTGACTACATCGCCCACGAAA
CTCCCCACTGCAAAGCAACAGCAGAAAAGTATCTCTGAGAAATCTTCTTGGCAAAGCATT
AACAGCGACGTTTCTTCAACAGAATCGTATTCTAGCATCGAAAGTCAAAATGCTCTAAAT
ATCTTGGTGTCCTCTGTTACTTCAGCCAGTGCAAACCCCAATAACACAAACGGCTTATCG
GTATCAGCATCGCAAGAAAGAACGAACCTGCATAAATCGATATTAGACGCGCCGAAAGAC
ACTGTGTCAGTGTCGAAGCTGGTCAATATTTTATCCTCCACATCCGTCACGAACACTTCC
CCCTCGATTCTTTCCAATACGAGTAATATGCAGAATGGAATCCCGACGTCTTTTAGTGAT
AGCACCTTCACCAGCTTGAAGAGCATCGCTGAGAAAGCTGTTGCCGATGCGGGGTTGGAG
CAGGAAGGCATAAATTTCTCCTTGGCTTACACGTCACCGGATCCGAGCAACATGATCATT
ACGACTACACAGTCTCGCTCTGAATTGGTTTCTTTAAATCAGCAACAACAACCCGGTCTG
ATGAGACAAATTCCAAAAGGGACTGGTGAGACAAGAATGGCACCTTTGCTTGGTGTGGCG
CCGTTAGGACCGCTGCCACTAAGTAAGGATAACATGTACCAGCAAGCCATGCTCGAAGCT
TCGTGGAGACACATGCCGCACCCTTCCGATTCGGAGAGATTACGGCACTACCTTCCCAGA
AACCCATGCCCTACTCCGATGTATTATCATCAAACTCCTCTTCCCCACCACGACTCAATC
GACTTCTATCTCCGTCTATCTACTGAAACGCTCTTTTTTATTTTCTACTACATGGAGGCC
ACTAAGGCTCAGTATTTGGCTGCTAGAGCTTTGAAAAAGCAATCATGGAGGTTTCATACT
AAGTACATGATGTGGTTCCAGCGACACGAAGAACCTAAAACGATCACTGATGAATACGAG
CAGGGAACGTATATCTATTTCGACTATGAAAAGTGGGGGCAACGGAAGAAGGAGGGATTC
ACGTTCGAGTACAGATATCTTGAGGACAGAGAACTTCAGTAA

InterProScan

PIRSF
CCR4-NOT_su3/5 (IPR012270) - T[7-587] 1.5E-132 - T[549-753] 1.5E-81
Pfam
Not_N (IPR007207) - T[9-238] 9.5E-91
Gene3D
CCR4-NOT_su2/3/5_N_sf (IPR038635) - T[603-748] 2.6E-66
Pfam
NOT (IPR007282) - T[622-747] 6.5E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNOT3_HUMAN 64.502 % 323 2.61E-99