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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...' > 
  2. Molecular Tool 'Ci-FoxD::Tbxa' > 
  3. Transcript 'Harore.CG.MTP2014.S2...' > 
  4. Transcript 'KH2012:KH.C9.220.v2....' > 
  5. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S134.g02507.01.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Gene model

Haaura.CG.MTP2014.S134.g02507

Location

S134 [97,949 / 98,285]

Sequences

Amino acid sequence

Length: 112

>Haaura.CG.MTP2014.S134.g02507.01.p
EEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPK

Nucleotide sequence

Length: 336

>Haaura.CG.MTP2014.S134.g02507.01.t
GAAGAAGATACAACCGCAATCGTCTGCGACAACGGATCGGGATTGGTTAAATCTGGGTTT
GCTGGCGACGATGCTCCCAGAGCTGTTTTTCCGTCAATTGTAGGACGCCCCAGACATCAA
GGTGTTATGGTCGGTATGGGACAGAAAGACAGCTACGTAGGAGACGAAGCACAAAGCAAA
CGTGGTATTCTCACACTGAAATATCCGATTGAACACGGAATTATTACTAATTGGGACGAT
ATGGAAAAAATTTGGCATCATACTTTCTACAATGAACTTCGCGTTGCCCCTGAAGAACAT
CCAACTCTTCTTACGGAAGCTCCATTGAATCCCAAG

InterProScan

PANTHER
Actin (IPR004000) - T[1-112] 1.2E-75
Pfam
Actin (IPR004000) - T[2-112] 1.8E-37
PRINTS
Actin (IPR004000) - T[25-34] 5.5E-24 - T[48-59] 5.5E-24 - T[60-82] 5.5E-24
ProSitePatterns
Actin_CS (IPR004001) - T[52-62] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 95.536 % 234 2.14E-78
ACTS_HUMAN 96.429 % 235 1.13E-78
ACTC_HUMAN 96.429 % 235 1.14E-78