- Molecular Tool 'Titf>Otx-TALEN (Yoshida2017)' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S134.g02498.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S134 [96,847 / 98,297]
Amino acid sequence
Length: 379
>Haaura.CG.MTP2014.S134.g02498.01.p
MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
SKQEYDEAGPSIVHRKCF*
Nucleotide sequence
Length: 1,137
>Haaura.CG.MTP2014.S134.g02498.01.t
ATGTCTGATGGCGAAGAAGATACAACCGCAATCGTCTGCGACAACGGATCGGGATTGGTT
AAATCTGGGTTTGCTGGCGACGATGCTCCCAGAGCTGTTTTTCCGTCAATTGTAGGACGC
CCCAGACATCAAGGTGTTATGGTCGGTATGGGACAGAAAGACAGCTACGTAGGAGACGAA
GCACAAAGCAAACGTGGTATTCTCACACTGAAATATCCGATTGAACACGGAATTATTACT
AATTGGGACGATATGGAAAAAATTTGGCATCATACTTTCTACAATGAACTTCGCGTTGCC
CCTGAAGAACATCCAACTCTTCTTACGGAAGCTCCATTGAATCCCAAGGCGAATAGAGAA
AAGATGACCCAAATTATGTTCGAAACGTTCAACGTACCGGCAATGTACGTTGCCATCCAA
GCAGTTCTTTCGCTATACGCATCTGGAAGAACAACAGGAATTGTACTTGATTCCGGGGAT
GGTGTCTCCCACAATGTTCCCATCTATGAAGGATACGCTCTCCCACATGCCATTGCCAGA
CTTGACTTGGCCGGGCGCGACCTCACTGATTACCTAATGAAGATCCTCACAGAGAGAGGA
TATTCCTTCGTTACGACAGCTGAACGTGAAATCGTTCGTGATATTAAGGAAAAACTTTGC
TATGTTGCTCTCGATTTCGAACAGGAAATGGCAACCGCCGCATCGTCAACATCCCTGGAA
AAAAGCTACGAACTTCCCGATGGCCAAGTTATCACCATCGGTAACGAGAGATTCCGATGC
CCCGAAACTCTTTTCCAACCCTCCTTTATCGGAATGGAATCAGCCGGTATTCACGAAACA
ACATACAACTCTATAATGAAGTGCGATATCGATATAAGAAAAGATCTATATGCCAACAAC
GTCTTGTCTGGAGGAACCACAATGTATCCTGGTATTGCTGATCGTATGCAAAAGGAAATC
ACTGCTCTTGCACCAAGTACGATGAAGATCAAAATTATCGCTCCTCCAGAACGTAAATAC
TCTGTATGGATTGGAGGATCTATCCTAGCATCTCTCTCTACCTTCCAACAGATGTGGATC
TCAAAACAAGAATATGACGAAGCTGGACCATCAATTGTTCACAGAAAATGTTTCTAA
| PANTHER |
Actin (IPR004000) - T[5-377] 6.2E-267 |
| Pfam |
Actin (IPR004000) - T[6-378] 2.6E-148 |
| SMART |
Actin (IPR004000) - T[8-378] 8.8E-235 |
| PRINTS |
Actin (IPR004000) - T[29-38] 6.7E-58 - T[52-63] 6.7E-58 - T[64-86] 6.7E-58 - T[118-131] 6.7E-58 - T[143-162] 6.7E-58 - T[239-255] 6.7E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.594 % | 769 | 0 |
| ACTS_HUMAN | 97.326 % | 767 | 0 |
| ACTC_HUMAN | 97.861 % | 769 | 0 |