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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S5...' > 
  2. Transcript 'Haaura.CG.MTP2014.S1...' > 
  3. Molecular Tool 'Ci-Rga-mRNA' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...' > 
  5. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S134.g02485.05.t

Possible name(s)

MYL1; MYL6; MYL6B

Gene model

Haaura.CG.MTP2014.S134.g02485

Location

S134 [68,272 / 69,079]

Sequences

Amino acid sequence

Length: 172

>Haaura.CG.MTP2014.S134.g02485.05.p
LYFLSQADFSEQMVEDVKEAFELFDKTGDTKIFYNQAGDVMRALGECPTNEDVLKFMGNP
SKEGKTRIHVFYLQDMDAKKLSYEEFLPIFDKIIKESVKGTYEDFVEGLRVFDKDGNGTV
MGAEIRHVLTTLGEKLTSAQVGSMMQGQENSSGILNYEDFSKFLLEQPQKAL

Nucleotide sequence

Length: 516

>Haaura.CG.MTP2014.S134.g02485.05.t
CTTTATTTCCTTTCACAGGCTGACTTCAGTGAACAAATGGTTGAAGACGTCAAAGAAGCT
TTCGAGCTTTTCGACAAAACCGGTGACACTAAAATATTCTACAATCAGGCTGGTGATGTG
ATGAGAGCTCTAGGAGAATGTCCGACCAACGAAGATGTTTTGAAGTTTATGGGAAATCCC
AGCAAAGAAGGTAAAACACGTATACACGTTTTCTATCTTCAAGATATGGACGCTAAAAAA
TTGTCCTATGAAGAATTCCTTCCAATCTTTGACAAAATCATCAAAGAATCCGTCAAAGGA
ACCTACGAAGATTTTGTTGAAGGTTTGAGAGTTTTTGATAAAGACGGAAACGGTACAGTT
ATGGGAGCTGAAATCAGACACGTCCTCACAACTCTTGGTGAAAAACTTACATCAGCCCAA
GTCGGCTCCATGATGCAAGGACAAGAAAATTCCAGTGGAATTCTTAACTACGAAGATTTC
AGTAAATTCTTGTTGGAACAACCACAAAAAGCATTG

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[9-164] 6.22E-29
ProSiteProfiles
EF_hand_dom (IPR002048) - T[12-47] 10.329 - T[100-135] 10.915 - T[150-170] 5.28
SMART
EF_hand_dom (IPR002048) - T[16-44] 1.9 - T[104-132] 3.0

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MYL6_HUMAN 54.088 % 178 4.1E-58
MYL6B_HUMAN 50.633 % 171 1.01E-54
MYL1_HUMAN 53.165 % 172 2.8E-55