- Clone 'csma097c07' >
- Clone 'CCAO9053' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1335.g08129.01.t
Possible name(s)
DHX16; DHX8
Gene model
Location
S1335 [3,501 / 13,908]
Amino acid sequence
Length: 1,192
>Haaura.CG.MTP2014.S1335.g08129.01.p
MHTTEVQHCFYNSKEEEGMDDLEKLEYLSLVSKVCTELDNHLGMNDKDLAEFIINLADKN
VTLEKFSTALSKNGAEFPESFTKNLLSLIQRMRPPKEKKIKKGKKGKNKDESDAKEDVLL
SRHKQMFPALCRPDNPEYIKTLVSDDEKDASSTMAALESLLPGGIGGFNPKEVKTERNDD
KDVKSEKADKTNRSDRRRSRRSSSRSPRRSRSPSRRRRERRKSRSRSKSPYRNSSPHRSR
GRYKSRSRSPRRRGNRSRSRSRSPRGRHDRRSERSKPRKELNRRDSLPEEPKIGDIFDGK
VTSIMQFGCFVQLEGLKKRFEGLVHISELRMEGRVASVTDVVQRGQRVKVKVLTFTGTKT
SLCMKDVDQTSGEDLNPARTRRSQPAGEQDSEVAGRNPDRPSNLPIFEGDTEVSGSPRKI
NKMSDMERWEIKQMVSAGCMDVTELPDFDEESGVLPKDDSDNEDLEIDLVEEEPPFLNGH
TKQSIDLSPVICFSLVYLFDYHLKVRIVKNPDGSLSKAAMMQSALSKERREVKQQQRESE
TDSAPAGMSKNWTDPLPDPETQQSASSVKGAGLMQTDIPEWKKQAFGGKKASYGRKTEMS
ILQQRQSLPIYKLKDQLIQAVHDNQILIVIGETGSGKTTQITQYIAEAGYTLRGKIGCTQ
PRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSQETVIKYMTDGMLLRECLIDGDVK
QYSVIMLDEAHERVIHTDVLFGLMKKIVQKRPDMKLIVTSATLDAVKFSQYFFEAPIFTI
PGRTFPVEILYTKEPETDYLDASMITVMQIHLTEPPGDVLLFLTGQEEIDTACEILFARM
RTLGPEVPELLILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDP
GFVKQKVYNSKTSIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLHTAV
PELQRTNLASTVLSLKAMGINDLLSFDFMDPPPMETLVTAMEQLFHLSALDDEGLLTRLG
RRMAEFPLEPMLCKMLIMSVHLGCSDEILTIVSMLSVQNVFYRPKEKQALADQKKAKFHQ
AEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARTLRRAQDVRKQMLGIMDRHKLDVVSCG
KNTAKIQKAICSGYFVNSAKKDPQEGYRTLTDQQVVYIHPSSALFNRQPEW*
Nucleotide sequence
Length: 6,131
>Haaura.CG.MTP2014.S1335.g08129.01.t
AGTATTGTATTACCCAGTAATTTGCCAGTCTTCTGTTTCGTAATGGGTTCCTCGAAAAAG
CATAAAAAGGAGCACAAACGCAAACACAAGAAGTCGAGCGCGGTCGATGCAGACAGTCCC
GAAGAAAAAAGATCAAGGATTGCCGATCACGACGTAGATAGCACGAGACATCAGAAGAGC
CATCATCACAAGAAGAAAAGTCACAGAAGAGGCAGAGATGATTCCCGATCTCCTGAAAGA
GAGCATAAAGAAAGAGATCGTTCTACTTCGAGAAGAAAAGATAAAGAAACTGTTGATACT
AATCGTAAAGGTACATCAAAATCACCGGACAAGGATACTATTGGCTCCGCGAATGGCGGT
GGAGGAGATGCCTCGCTTTCAATCGGAGAAACAAACATTTTGAGGAGTAAGTTGGGGTTG
AAACCTCTGAGCATGGAGAAGAATGGCGACACGGAAACTGGCGCTGATAAAGAGGAATTT
GTCCACGCACCCGCAGAAGATTTGTGGGAGAAGAAAAAGAGTGAGGCACTTAGAGAGAAA
CTGAAATTGATAAAAGAAAAAAGAGATTTAAACAAGAAAATGAAAAAGGTGAAAACTTTA
GGTGAAGAAGACGAGGAAGAAAATGATATTTCGGCCTGGGTGGAGAGGAGCCGAGTGAAG
GAACAGAGAAAAATCATGAAGGAAAAAACAGAAAAAGAACTGATGGCAATGGATGCCGAA
TTCGGAGTCGGGAGTCTCGTCGACCAAGAGTTCGCAGAGGAAGAAAAATTGAAAAAACAG
ACGAAATATTCATCAAAAAATTTGACTGGCATGAACGTTGAACATTCGTTAGGAATGTTC
AAGGAGGGAAAAGCTGTCGTACTCACCCTCAAAGATAAAGAGATTCTCGGTAGCGACGAA
GAAGACACACTAATAAGCACCAATATCGCGGATGATGAGAAAGCACAGAAAAACGTAACA
ATAAAAGCTAGAGGAATGGGATACAAAGCGTATGAAGAAGAGGAAGTGGACGACCTTGGA
TTCTTCAAACCGAAAACCATGCTCTCGAAATACGATGAGGAAATTGATGGGGAGGAAATA
AACAAATTTAAAATCGGTAGAGACGGCCACGTAGATGCGTCGTGGGAAAAGCAAAAAGAG
GAAATGAAGAAAGAAATTCGTGCAAAAGGTGAAAGCCTTAAGCTTCCTGAGCTTAAGTTA
GCTTCTGAATACTATTCAGAACAAGAGATGACCAAGTTTAAAAAGCGAAAGAAAAAGGTG
AAAAGAGTGCGAAGGAACGTGAAGCCCGATGATTTGGTGCCACTACCCGGGGAATCTTCT
GTTGTCAATCACGGATCCAGGCGTAGACCGGAACGGGGCAATATTCCGGGCTGGGAAGAG
GGGTTGGAGAAAGCGAAAACGGATGAAAGTAGTATCACTTCAACTACGACCACAAGGTCA
GTTATCGTGGATGTCGATGATGCTGGAAGTGAACTGCAGAGAGCGCTTGATAAGGCAAGA
AAGGCTAAAAAAAGAAATAAAACAACAATGGATACTGGTGCAACCAAAGTGGCAGAGCAT
TTCGAAACATTAAATAAAATTTCTCTTCAAAATCCCACTGCGAATTATTCTACTGCGATA
TCTCTCAACTCTACTGATGAATTTTGCAGACAGCTTGGTCAGAGTGTGTTAGAACAACCC
ACAGTAAAGGAAATCGAACCAGACGAAGATTCCATTGAAGAAGTCGAAATGGAAATCGAA
GATGAAGAACAACCGATAACAAACTGGTCCAGTGTTCAGGCTTCCGCAGCCATAGAAAAG
TCAAGTGCTGGCAAGACTGCAGACGGGGATGATTCGCATGCCCCGATCGAAGCCGAACCG
TTAGTGGCTGCCGGTTTGGCTGGGGCATTGAAATTAGCCGGACACAAAGGTTATTTGATA
GGTGAAAAATCCAAAGGGTCCGCTGGGATGAGCAGTGGCCTGATAAACATACTGTCGAAA
AATTACTCGGTCGAAGATAAAAACGCCATCGACCATTTGGACAAGTATGCTCATGAAAAA
TATTCCAGGGATAACAGCAGGCATAGTCGGGGCATGGTCACAGAGTTTGAAGAAAAGAAA
AATTACACTCCCCAAGTCAAGATAGAGTATTGCGACAAAATGGGAAGACTAATGAATCCA
AAGGAGGCGTTTCGCGAACTGTCTCACAGGTTCCACGGCAAGGGATCGGGTAAGATGAAG
TTGGAGAAGAGACACAAGAAGAGGGCAGAAGATGACATGATGTTAAGGATGAGTTCGACA
GACACACCTCTCAATACTGTCGCTATGATGAAACAAAAGTGGACCTGGAGCCATGTCAAA
GAAATGAAGACCCATCCTCTCCGTGGGATGAAAAAAAAAGGGAAAGATAATGGACACGGA
ATAGATATATCTGAGAATAAAATTTGCAATTGTGCTTCATTTGGTTTGTATCCTAAAACT
AAAACTTTAGACCAAGCGTTGCGCTATCTATTTCAACCTTGCCACCTAACTATGACTACA
CTCAAACTCCGTGGAACTTTTCTGGTTTCACATTCATGCATACAACTGAAGTACAGCATT
GTTTCTACAATTCAAAAGAGGAAGAAGGAATGGATGATTTGGAGAAATTGGAATATCTTT
CGCTAGTGTCAAAAGTCTGCACTGAGCTTGATAATCACTTGGGAATGAATGACAAAGACT
TGGCTGAATTTATTATTAATCTGGCTGACAAAAACGTAACCTTGGAAAAATTTTCCACTG
CCTTGTCTAAGAACGGTGCGGAATTCCCAGAATCTTTTACGAAAAATTTGTTGTCGTTAA
TTCAACGTATGCGACCGCCAAAGGAAAAAAAAATCAAAAAAGGCAAAAAGGGTAAAAACA
AAGATGAATCTGATGCAAAAGAAGATGTCCTGCTTTCACGTCATAAACAGATGTTCCCTG
CTCTCTGTAGACCTGACAATCCAGAATATATTAAAACACTTGTCTCAGATGATGAAAAAG
ATGCTTCTTCAACCATGGCCGCCTTAGAATCTCTACTTCCCGGAGGCATTGGAGGATTCA
ATCCAAAAGAGGTAAAGACTGAAAGAAATGATGACAAAGATGTGAAGAGTGAAAAGGCAG
ATAAGACTAATAGAAGTGATAGAAGGAGAAGCAGAAGAAGTAGTTCAAGATCACCACGAC
GTTCCAGGAGTCCTTCAAGGAGACGGAGGGAAAGAAGGAAATCTCGTTCAAGATCAAAGA
GCCCTTACAGAAACAGCAGTCCTCATAGATCAAGGGGGAGGTATAAATCTCGCTCCAGAT
CACCTAGAAGAAGAGGAAATCGTTCGAGATCCAGAAGCAGGTCTCCAAGAGGCAGGCATG
ACAGAAGAAGCGAACGTTCGAAACCGAGAAAAGAATTGAATAGGAGGGATTCCCTCCCCG
AGGAACCCAAGATCGGTGACATATTCGACGGAAAGGTGACTTCTATAATGCAGTTTGGAT
GCTTTGTACAACTAGAAGGGCTGAAGAAACGATTTGAAGGTTTAGTACACATATCAGAGT
TACGTATGGAAGGCCGTGTTGCAAGTGTAACGGACGTTGTGCAGCGTGGGCAAAGGGTTA
AAGTTAAAGTGCTTACTTTCACCGGAACGAAAACAAGTCTTTGTATGAAAGATGTTGATC
AAACAAGCGGTGAAGATTTGAACCCAGCAAGAACTCGACGTAGCCAACCTGCGGGAGAGC
AAGACAGTGAAGTAGCTGGTAGAAATCCAGACAGGCCATCAAATTTACCGATATTTGAAG
GAGATACTGAGGTGTCAGGTTCACCCCGGAAAATTAACAAAATGTCCGACATGGAGAGAT
GGGAGATAAAGCAAATGGTATCAGCTGGATGCATGGATGTGACAGAGTTGCCAGATTTTG
ATGAAGAGTCAGGTGTTTTACCAAAGGATGACAGCGATAACGAAGATCTTGAAATAGATT
TGGTTGAAGAGGAACCGCCTTTCTTGAATGGTCATACAAAACAAAGCATTGACTTGAGTC
CTGTAATTTGTTTCTCCCTTGTTTACCTATTCGATTATCATTTGAAGGTTCGAATAGTGA
AAAATCCTGATGGCTCATTATCAAAAGCGGCAATGATGCAAAGTGCTCTTTCCAAGGAGA
GACGAGAGGTTAAACAGCAACAGCGAGAGTCTGAAACAGATTCAGCTCCAGCTGGTATGA
GTAAGAATTGGACAGATCCTCTCCCAGATCCAGAGACGCAGCAATCTGCATCCAGTGTAA
AGGGAGCTGGTTTAATGCAGACTGATATTCCGGAATGGAAAAAGCAAGCTTTTGGAGGAA
AGAAGGCATCATACGGAAGAAAAACAGAAATGTCGATCCTCCAACAACGTCAAAGTCTGC
CCATCTATAAACTGAAAGATCAATTGATCCAGGCGGTCCACGACAATCAAATTCTTATTG
TCATTGGTGAAACTGGTTCTGGAAAAACAACACAAATAACACAATATATAGCCGAAGCCG
GATACACACTCCGCGGTAAAATAGGTTGCACTCAGCCACGTCGTGTGGCCGCCATGTCCG
TGGCTAAACGGGTGTCGGAAGAATTCGGGTGTCGACTGGGACAGGAAGTGGGGTACACCA
TTCGTTTTGAAGATTGCACCAGTCAGGAAACTGTAATAAAATACATGACAGATGGTATGC
TGCTGAGAGAATGCTTGATAGACGGTGATGTTAAGCAGTATTCTGTTATCATGCTTGACG
AAGCTCACGAACGTGTCATCCACACCGACGTTTTGTTTGGTCTCATGAAGAAAATCGTCC
AGAAGAGACCAGATATGAAACTGATTGTAACATCTGCCACATTGGATGCTGTCAAATTTT
CACAATATTTCTTCGAAGCACCAATATTCACAATACCAGGTCGAACATTCCCTGTTGAAA
TTCTGTATACTAAAGAACCAGAAACAGATTACTTGGATGCTTCTATGATCACAGTGATGC
AGATTCATTTGACAGAGCCTCCTGGAGATGTACTCCTGTTTCTTACTGGTCAGGAGGAGA
TTGATACGGCATGTGAGATCCTATTTGCAAGGATGCGTACTCTTGGTCCTGAAGTTCCTG
AGCTCTTAATACTTCCTGTTTACTCAGCTCTTCCTTCTGAAATGCAAACGAGAATTTTTG
ATCCAGCGCCGCCAGGAAGCAGGAAGGTTGTTATTGCCACAAATATCGCTGAAACTTCAC
TGACAATCGATGGCATATACTATGTTGTGGATCCAGGATTCGTAAAGCAAAAAGTTTACA
ATTCCAAAACTAGCATAGATCAACTCGTGGTGACACCGATCTCTCAAGCACAGGCCAAGC
AGAGAGCTGGAAGAGCCGGCAGAACCGGTCCCGGAAAGTGTTATCGATTGTATACTGAAA
GAGCTTACAGAGATGAAATGTTGCATACCGCTGTACCAGAATTGCAGAGAACAAACTTAG
CATCGACAGTATTGTCATTGAAAGCGATGGGCATCAATGATCTTCTGTCATTTGATTTTA
TGGACCCTCCACCAATGGAAACCTTAGTTACTGCTATGGAACAGTTGTTTCACTTGAGTG
CCTTGGATGATGAAGGGTTGCTGACACGACTCGGTCGAAGGATGGCTGAATTCCCTCTTG
AACCAATGCTGTGTAAGATGTTGATTATGTCTGTTCACCTTGGATGCAGTGATGAAATAC
TTACAATAGTCTCCATGCTTTCTGTCCAAAATGTATTTTATCGTCCTAAGGAAAAACAAG
CGCTTGCAGACCAGAAGAAAGCCAAATTCCATCAAGCAGAGGGAGATCATTTAACACTGT
TGGCTGTTTATAATTCATGGAAAAATAATAAATTCAGTAATCCGTGGTGCTATGAGAATT
TCATTCAAGCAAGGACACTGAGAAGGGCTCAAGATGTGAGAAAACAGATGCTTGGGATAA
TGGACAGGCATAAACTCGATGTTGTCTCCTGCGGCAAGAACACTGCAAAAATTCAAAAGG
CAATTTGCAGTGGATATTTTGTAAATTCTGCTAAAAAGGATCCCCAAGAGGGATACAGGA
CGTTAACGGATCAGCAAGTTGTTTATATCCATCCAAGTAGTGCTTTGTTTAACAGACAGC
CCGAGTGGTAA
| SUPERFAMILY |
NA-bd_OB-fold (IPR012340) - T[282-367] 1.57E-13 |
| Pfam |
S1_domain (IPR003029) - T[290-360] 1.5E-14 |
| SMART |
S1_dom (IPR022967) - T[292-365] 1.5E-15 |
| ProSiteProfiles |
S1_domain (IPR003029) - T[294-365] 16.646 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[603-1131] 2.46E-132 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[606-790] 1.6E-32 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[615-764] 3.9E-7 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[618-781] 18.368 |
| ProSitePatterns |
DNA/RNA_helicase_DEAH_CS (IPR002464) - T[723-732] . |
| CDD |
Helicase_C (IPR001650) - T[788-945] 1.95592E-13 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[799-979] 17.43 |
| Pfam |
Helicase_C (IPR001650) - T[810-938] 3.7E-12 |
| SMART |
Helicase_C (IPR001650) - T[834-938] 9.4E-18 |
| SMART |
Helicase-assoc_dom (IPR007502) - T[999-1089] 7.8E-39 |
| Pfam |
Helicase-assoc_dom (IPR007502) - T[1000-1088] 1.1E-24 |
| Pfam |
DUF1605 (IPR011709) - T[1146-1191] 4.2E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX8_HUMAN | 81.918 % | 1539 | 0 |
| DHX16_HUMAN | 57.744 % | 758 | 0 |
| PRP16_HUMAN | 46.991 % | 712 | 0 |