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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'
  2. Transcript 'Harore.CG.MTP2014.S1...'
  3. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S12.g00386.01.t

Possible name(s)

YTHDF1; YTHDF2; YTHDF3

Location

S12 [210,225 / 215,661]

Sequences

Amino acid sequence

Length: 551

>Haaura.CG.MTP2014.S12.g00386.01.p
MHFPYMGEWSTAGESVPYLSGYNSVGNGEPHHSLMQDGMFGQTTGGLGNGQAYFNQPVFQ
HGNEFTAWTSPSMGHSTSLDSRIGHQNATNPNDFYSPVMPPIQQDYLGRNDMINTTNNIG
NMAGQNMQGGLLSGGMSAGDCSHKMSPSPMKIIDQGMHSMNISNMGGNVDPMGSKSMVTQ
GGPNMGNVDVVGVHQMPSKLSSVNNAPSMPPVSKPVSWAAIASKPAKPQPKPKTKPSVGP
GLPPPIKHNMDIGNWDNSKIPPRAVTKIQMENPSTTWTPSRPVGYHYENGFEATTDLSNS
ERDKEGQKENNTQVALAPANPVLEKLRMQNEYNPKRLTMDLRNSRFFVIKSYSEDDIHRS
IKYNIWCSTEHGNKRLDATFRAQKSRGPVILLYSVNGSGHFCGVAEMMTCVDYSSRAGVW
SQDKWKGKFQVKWIYVKDVPNTVLRHIRLENNDNKPVTNSRDTQEVPAEKGRQVLKIIAN
YKHQTSIFDDFGHYERRQQEEETVRNKAAQPTVNRERKPIDKLVIKFYPLLNCWRFLFHT
LAQFLDSLAI*

Nucleotide sequence

Length: 2,026

>Haaura.CG.MTP2014.S12.g00386.01.t
ATGAATTCTTCACTGTGGAATATTTTATATAAAGCGTTCGAATCGATTTTGAATCATACC
ACAAATTGGAGCACTTTACTCTTCCATGTATTCAAACCAGGTCTGTTATACAGTATTTAG
CTCAACATTGCATGGTGAAGCAAGCCTGAAATTATGTCCGATGCAATTCAGTTCTCCTGC
TGAACTGAACGATGGATATTTAAAATAATAATATATTTTTCAGCATTCTAACTCCCAAGC
TGACAGAATTCAGAATGGGTTTGATCATAAAGAGCTAGTCCAGGAAGAGTTTAATTATTT
GCACCCTGCTGCTACACAACAGGGCTATGGGATTCCAACTAATGAACAATACATTCCAAG
TTACTATGGACAAATGCATTTTCCTTACATGGGAGAATGGTCAACCGCTGGTGAAAGCGT
CCCATATTTGTCGGGCTATAATAGTGTTGGCAATGGCGAGCCACACCACAGCCTCATGCA
AGACGGTATGTTTGGCCAGACAACTGGGGGACTCGGAAACGGCCAGGCCTACTTTAACCA
GCCGGTGTTTCAGCACGGTAATGAGTTCACGGCCTGGACGTCACCGTCGATGGGCCACAG
TACGAGCCTAGATTCCCGTATCGGACACCAAAACGCCACCAATCCCAATGATTTTTATAG
CCCTGTCATGCCACCCATACAACAAGATTACTTGGGTAGAAACGACATGATCAATACCAC
AAATAATATTGGCAATATGGCAGGTCAAAACATGCAAGGTGGGTTGTTATCCGGCGGAAT
GTCTGCAGGTGACTGCAGTCACAAGATGTCGCCGTCTCCGATGAAAATCATTGATCAAGG
AATGCACTCTATGAATATATCTAACATGGGTGGGAACGTGGACCCTATGGGTAGTAAATC
TATGGTCACGCAGGGTGGCCCTAACATGGGGAACGTCGACGTTGTCGGTGTTCACCAAAT
GCCCTCTAAACTCTCTTCTGTCAATAATGCACCCTCGATGCCTCCTGTTTCCAAGCCGGT
TTCTTGGGCTGCAATTGCGTCCAAACCAGCTAAGCCTCAGCCAAAGCCGAAAACTAAACC
AAGCGTGGGTCCTGGATTGCCACCGCCTATAAAGCACAATATGGACATTGGAAACTGGGA
CAATAGTAAAATACCACCTAGAGCGGTGACCAAGATCCAAATGGAGAATCCGTCTACCAC
ATGGACACCTTCCAGGCCAGTTGGATATCATTATGAAAATGGGTTTGAAGCTACCACTGA
CTTGTCAAATAGTGAAAGAGACAAAGAAGGCCAGAAAGAGAATAACACTCAAGTGGCACT
GGCTCCCGCAAATCCAGTGCTAGAGAAATTAAGAATGCAAAACGAGTATAATCCAAAGAG
ACTGACGATGGATCTTCGTAACTCACGGTTTTTCGTTATCAAGTCGTATTCGGAAGACGA
CATACATCGTTCCATCAAGTACAACATATGGTGTTCGACAGAGCACGGCAACAAGAGGCT
GGATGCTACGTTCCGAGCCCAAAAGAGCCGTGGCCCTGTCATATTGCTCTATTCTGTCAA
CGGATCTGGACACTTTTGCGGAGTTGCGGAAATGATGACCTGCGTGGATTATAGCAGCCG
GGCTGGTGTATGGTCACAGGACAAGTGGAAAGGGAAATTTCAAGTGAAATGGATCTACGT
TAAAGATGTTCCCAACACTGTTCTGCGTCACATACGACTCGAAAACAATGACAATAAGCC
GGTAACGAACTCTCGCGACACACAGGAAGTCCCTGCAGAAAAAGGACGGCAAGTGCTTAA
AATAATCGCCAACTATAAGCACCAAACAAGTATTTTTGACGATTTCGGCCACTATGAGCG
GCGTCAGCAGGAAGAAGAGACCGTACGGAATAAGGCCGCACAGCCGACAGTGAACCGAGA
GCGTAAGCCCATTGATAAACTCGTAATAAAATTTTATCCGCTTCTAAATTGCTGGCGTTT
TCTCTTTCATACACTAGCACAATTCCTCGACAGTTTAGCCATTTAA

InterProScan

ProSiteProfiles
YTH_domain (IPR007275) - T[344-478] 46.597
Pfam
YTH_domain (IPR007275) - T[344-478] 2.3E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
YTHD1_HUMAN 46.442 % 391 2.06E-130
YTHD2_HUMAN 43.662 % 380 6.31E-126
YTHD3_HUMAN 76.136 % 299 1.58E-94