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TRANSCRIPT CARD

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  1. Clone 'cilv006n05' > 
  2. Region 'REG00001550' > 
  3. Transcript 'KH2012:KH.L172.2.v1....' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S125.g02371.01.t

Possible name(s)

RBPJ; RBPJL

Gene model

Haaura.CG.MTP2014.S125.g02371

Location

S125 [15,717 / 24,321]

Sequences

Amino acid sequence

Length: 561

>Haaura.CG.MTP2014.S125.g02371.01.p
MYHLNVTPDKQQTSPHGCLVVSETDQQRSQVKERVNGTPNQNGGTSTSSKPRSVFENRPP
QRLTREAMSKYLRERNDQTLVILHAKVAQKSYGNEKRFFCPPPCLYLMESGWKQKQQILE
EADQAPEAGQVHAFIGIGSSDQEMQQLNLDGKNFCTAKTLYISDTDKRKHFMLCVKMFFG
SGLEVGAFNSRRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENG
NFHASSIQWGSFAIHLLDDDESESEEFTVRDGYIHYGQTVKLVCSTTGMALPRLIIRKVD
KQTAILNADDPVSQLHKCAFYLKDSERMYLCLSQERIIQFQATPCPKEPNKEMINDGASW
TIISTDKAEYTFCDGMGPTSKPVTPVPVVHSLQLNGGGDVAMLEVNGENFSPQLKVWFGE
VEADTMYRCEEGLLCVVPDISEFREGWTWVKQSVQVPINLVRHDGIIYPTNLTFAFTPEP
GPRQHCPAALNILHSKRSHHARQSSGERGIDSSDVDDDIDPGTYLPVSKRQALDMNGQLT
SHPNSGVMDPSNSNMLRTVT*

Nucleotide sequence

Length: 1,683

>Haaura.CG.MTP2014.S125.g02371.01.t
ATGTACCATCTCAACGTAACGCCGGATAAGCAGCAGACTTCACCTCATGGATGTTTAGTT
GTGTCTGAAACGGACCAGCAGAGAAGTCAAGTGAAAGAACGTGTGAATGGCACACCCAAT
CAAAATGGTGGAACTAGTACTTCTAGCAAGCCAAGGTCTGTGTTTGAAAACAGGCCTCCT
CAAAGACTAACCAGGGAAGCTATGAGTAAATATCTTCGAGAACGGAACGATCAAACACTC
GTAATATTACATGCTAAGGTTGCTCAAAAATCTTATGGCAACGAGAAGAGGTTTTTTTGC
CCACCTCCATGCTTGTACTTGATGGAGAGTGGATGGAAGCAGAAACAGCAGATCCTGGAG
GAAGCCGATCAAGCCCCAGAGGCAGGGCAAGTTCATGCTTTTATAGGAATTGGAAGCAGC
GACCAAGAGATGCAGCAACTGAATTTAGACGGGAAGAATTTTTGCACTGCGAAAACACTC
TACATATCAGACACAGATAAAAGAAAGCACTTCATGCTTTGTGTGAAAATGTTTTTCGGA
AGCGGCCTTGAAGTCGGCGCATTCAATAGCCGCAGAATCAAGGTGATTAGCAAGCCTTCC
AAGAAAAAACAGTCACTTAAAAATGCTGACCTGTGCATTGCTTCTGGAACCAAAGTCGCG
CTCTTCAACCGTCTTCGTTCACAGACTGTCAGCACGAGATACCTGCATGTCGAAAATGGG
AACTTCCATGCGAGTTCTATTCAGTGGGGATCATTTGCGATTCATCTCTTGGATGACGAT
GAATCGGAGTCTGAGGAATTTACTGTCCGCGATGGATACATACACTATGGCCAAACTGTC
AAGCTAGTTTGTTCTACCACAGGAATGGCACTACCCAGGCTGATTATAAGAAAGGTTGAC
AAGCAGACAGCGATACTCAACGCAGACGACCCTGTATCTCAGTTGCACAAATGCGCTTTC
TATCTGAAAGACTCTGAACGAATGTATTTGTGTTTATCGCAAGAAAGGATAATACAATTT
CAGGCCACTCCCTGTCCTAAAGAACCTAATAAAGAAATGATAAATGACGGCGCCTCTTGG
ACAATTATCAGTACAGACAAGGCAGAATACACATTTTGTGATGGAATGGGACCTACATCA
AAGCCTGTCACTCCTGTTCCTGTTGTACATAGTTTGCAGCTAAACGGAGGCGGGGATGTA
GCAATGCTTGAAGTGAACGGTGAAAATTTCTCTCCTCAACTGAAAGTCTGGTTCGGCGAG
GTAGAAGCAGACACAATGTACAGATGTGAAGAGGGATTGCTGTGCGTAGTACCGGACATA
TCAGAATTTCGTGAAGGATGGACTTGGGTCAAGCAGTCTGTTCAGGTTCCCATTAACCTT
GTAAGGCATGATGGAATTATTTATCCTACAAATCTAACATTCGCCTTCACCCCTGAACCC
GGTCCTCGCCAACACTGCCCAGCTGCTTTAAATATCCTCCACTCCAAGAGATCGCATCAT
GCTAGACAGAGTTCCGGGGAGAGGGGTATTGACTCGTCTGATGTGGACGACGACATAGAC
CCCGGTACTTATTTGCCTGTGAGCAAACGACAAGCGTTGGACATGAATGGACAACTTACT
TCACATCCAAACAGTGGAGTCATGGACCCCAGTAATTCAAATATGTTGAGGACGGTTACG
TGA

InterProScan

SUPERFAMILY
p53-like_TF_DNA-bd (IPR008967) - T[61-210] 3.73E-60
Gene3D
RBP-J/Cbf11/Cbf12_DNA-bd_sf (IPR037095) - T[63-206] 1.4E-165 - T[365-385] 1.4E-165
SMART
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[79-210] 1.4E-78
Pfam
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[80-210] 1.2E-46
SUPERFAMILY
BTD_sf (IPR036358) - T[208-365] 5.62E-65
SMART
Beta-trefoil_DNA-bd_dom (IPR015350) - T[211-360] 2.5E-90
Pfam
Beta-trefoil_DNA-bd_dom (IPR015350) - T[211-360] 3.2E-73
SUPERFAMILY
Ig_E-set (IPR014756) - T[366-478] 3.15E-37
CDD
RBP-Jkappa_IPT (IPR038007) - T[382-478] 6.64402E-67
Gene3D
Ig-like_fold (IPR013783) - T[387-480] 1.5E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SUH_HUMAN 79.733 % 763 0
RBPJL_HUMAN 51.288 % 483 7.33E-167