- Transcript 'Harore.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.C9.223.v1....' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S121.g02329.01.t
Possible name(s)
RAB11FIP1; RAB11FIP2; RAB11FIP5
Gene model
Location
S121 [12,796 / 17,527]
Amino acid sequence
Length: 440
>Haaura.CG.MTP2014.S121.g02329.01.p
MLGPTDITVIVHKAKNLLIKGKSSNDAYATMEFGKTKYATNVIESSINPEWHQECQFEMP
SGGVLDKLVVTITIFNKQHGKFGLQADDFIGQVEIPLSSIKCTDSKETTKWYNLQHRNPK
KEKKNRGQVEVSFKYLSKEKFALLPDKKSPLNLKNLKQKFRRRSEDEDSGVGYESNLRKG
QSLDNLHRTSSNSSDRSSNSKRRLSLVQSTRGLVKFPNRMDLGNNSKSVSVEVLNNPEIH
RVSSLKRSSSGNGRQDTTKQHVRNRSMPDTTLRALTSQGNDRNSPNICINGSHLYISDSG
NNSMNTSLECLQQNNSGLNRDTDIAELHASHNENQSNSRRATYSPESSSSNLSILYKPKK
HYRLDVKELCKVSTIHEDATVVFQNMSRDKLLELCIKQHNTIAIERKQARQLEDYIDTLL
VKVMMLKPQILDRSTCTKM*
Nucleotide sequence
Length: 1,320
>Haaura.CG.MTP2014.S121.g02329.01.t
ATGCTAGGTCCCACCGATATCACTGTCATAGTACATAAGGCAAAGAACCTTTTGATCAAA
GGTAAATCCAGCAATGATGCCTATGCCACAATGGAATTTGGTAAAACCAAATACGCCACG
AACGTCATCGAGTCTTCAATCAATCCAGAATGGCATCAAGAATGTCAGTTCGAAATGCCA
TCAGGAGGAGTGCTCGACAAACTTGTTGTCACGATAACTATCTTCAACAAGCAGCATGGG
AAATTCGGTCTTCAAGCTGATGATTTTATTGGTCAGGTTGAAATTCCACTGAGTTCCATA
AAATGCACGGATAGCAAAGAAACAACGAAATGGTATAACCTACAGCATAGAAATCCTAAA
AAAGAGAAGAAAAACCGAGGTCAAGTGGAAGTTAGCTTCAAGTACTTGAGCAAAGAGAAG
TTCGCCTTATTGCCCGATAAGAAAAGTCCTCTGAATCTGAAAAATTTGAAGCAGAAATTT
CGCCGTCGCTCAGAAGATGAAGACTCTGGAGTCGGTTATGAAAGCAATCTTCGTAAAGGG
CAATCTTTGGATAATTTACATCGCACATCGTCTAACTCCAGTGATAGATCGTCTAATTCA
AAACGAAGGCTGTCTTTGGTCCAGTCCACTAGAGGACTAGTTAAATTTCCAAATAGAATG
GATCTTGGCAACAACAGCAAGTCTGTCAGTGTAGAAGTACTCAATAATCCTGAAATTCAC
AGGGTCTCATCCCTGAAGCGTTCAAGCTCTGGGAATGGAAGACAAGACACTACAAAGCAG
CATGTAAGGAATAGATCAATGCCAGATACTACTTTGCGTGCACTGACCTCTCAAGGCAAC
GATAGAAACTCGCCAAACATATGTATAAATGGTTCGCACTTATATATTTCAGATTCAGGT
AACAACAGTATGAATACTTCATTGGAATGCCTGCAACAGAATAACTCTGGCTTGAACAGG
GACACAGACATCGCAGAACTGCATGCATCACATAATGAAAATCAGTCTAATTCAAGACGT
GCCACCTACTCACCGGAGTCTTCGAGTTCTAACCTGTCTATTCTGTATAAGCCAAAAAAG
CATTATAGACTTGATGTAAAAGAATTATGTAAGGTTTCTACCATTCACGAGGATGCCACA
GTCGTTTTCCAGAATATGAGTCGCGATAAACTTCTTGAGCTTTGTATCAAGCAACATAAC
ACTATTGCCATAGAGAGAAAACAAGCCAGACAACTCGAGGACTATATAGACACTCTTCTC
GTCAAAGTAATGATGCTGAAACCGCAAATATTGGATAGGTCCACTTGTACAAAGATGTAG
| ProSiteProfiles |
C2_dom (IPR000008) - T[1-94] 11.478 |
| Gene3D |
C2_domain_sf (IPR035892) - T[4-135] 2.9E-26 |
| PANTHER |
FIP_classI (IPR037789) - T[4-326] 3.3E-51 - T[328-434] 3.3E-51 |
| SMART |
C2_dom (IPR000008) - T[6-109] 6.4E-14 |
| Pfam |
C2_dom (IPR000008) - T[7-114] 2.0E-19 |
| Pfam |
Rab-bd_FIP-RBD (IPR019018) - T[387-431] 8.6E-7 |
| SUPERFAMILY |
FIP-RBD_C_sf (IPR037245) - T[406-433] 1.18E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RFIP1_HUMAN | 34.783 % | 86.3 | 7.65E-18 |
| RFIP5_HUMAN | 26.627 % | 90.9 | 1.62E-19 |