- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.S927.1.v2....' >
- Transcript 'Moocci.CG.ELv1_2.S63...' >
- Transcript 'Cisavi.CG.ENS81.R143...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1201.g07848.01.t
Possible name(s)
POU4F1; POU4F2; POU4F3
Gene model
Location
S1201 [7,422 / 10,704]
Amino acid sequence
Length: 392
>Haaura.CG.MTP2014.S1201.g07848.01.p
MLTHHHHHRPGSPLGATSATSINGSPLSSNSPPEQKYAPLHNAADAMRRHCMPSPVTYSS
NLFAGFDESFLARAEALAAVDYTGKNQFKTDSSVSSYYPMSAPPPHHMGPQSHHGGVPMG
PGVVPPPPVYGTMPPPHSLHHPSALHSMPQCVTQGPLSIADSGADLMEQLSNPSHCSSFS
SYQPPSFTSSSVMMPTSEGMSFSVAAAAVASQPHYMSSMPNTHPGGVSVSAFNAQPPSSI
SFHPGAAMATPSTVPSDSHLQHGTACSPPNHPSLPVGDFDTDPRELEAFAERFKQRRIKL
GVTQCDVGQALAKLKLPGVGSLSQSTICRFESLTLSHNNMVALKPILMTWLDQAEAEYRR
KMEDSGLSEKKRKRTSIAAPEKRSLEAYFSLQ
Nucleotide sequence
Length: 1,176
>Haaura.CG.MTP2014.S1201.g07848.01.t
ATGCTGACACACCACCACCATCACAGGCCCGGATCCCCGCTCGGCGCAACCTCCGCAACG
TCGATAAATGGATCCCCGCTGAGCTCGAATTCTCCGCCCGAGCAAAAATATGCTCCATTA
CATAACGCCGCCGATGCGATGCGCCGACATTGCATGCCCTCCCCGGTAACGTATTCGAGC
AATTTGTTCGCTGGCTTCGACGAATCCTTTTTAGCCCGGGCCGAAGCATTGGCTGCAGTG
GATTATACCGGAAAGAATCAGTTTAAGACAGATTCGTCAGTGTCTAGCTACTATCCTATG
AGTGCACCTCCCCCGCATCATATGGGTCCACAGTCTCACCACGGGGGTGTTCCTATGGGG
CCTGGCGTGGTACCACCTCCACCAGTATACGGAACTATGCCACCACCACATAGCCTGCAC
CACCCGTCAGCTTTACACAGCATGCCACAATGCGTTACGCAGGGACCACTGAGTATAGCG
GATTCGGGAGCAGATCTTATGGAACAGTTAAGCAACCCGTCTCACTGCTCGTCGTTCTCA
TCGTACCAGCCGCCTTCATTTACATCATCATCAGTAATGATGCCAACTTCAGAGGGTATG
TCGTTCTCCGTGGCAGCAGCGGCAGTCGCATCTCAGCCCCACTACATGTCTAGCATGCCA
AACACGCATCCAGGTGGAGTATCTGTATCCGCGTTCAACGCCCAACCACCAAGTTCAATC
TCTTTCCATCCCGGTGCAGCTATGGCAACACCTTCAACGGTACCATCGGATTCTCATTTA
CAACACGGTACAGCCTGCTCACCGCCCAACCATCCTTCGCTGCCTGTTGGTGATTTCGAT
ACAGACCCGCGCGAGTTGGAGGCATTTGCCGAAAGATTCAAACAACGAAGAATAAAGCTT
GGAGTTACACAATGTGATGTCGGGCAAGCTCTCGCGAAATTAAAGCTCCCAGGCGTTGGA
TCATTAAGTCAAAGCACAATCTGCAGGTTCGAATCCCTCACACTCAGTCACAACAACATG
GTCGCATTGAAACCTATTTTAATGACGTGGCTGGACCAGGCCGAGGCCGAATACAGACGG
AAAATGGAAGACTCGGGACTGTCCGAAAAGAAGCGAAAACGCACGTCCATTGCAGCTCCA
GAAAAACGATCTTTAGAAGCGTACTTTTCATTACAG
| ProSiteProfiles |
POU_dom (IPR000327) - T[278-355] 46.536 |
| SMART |
POU_dom (IPR000327) - T[278-355] 9.8E-49 |
| SUPERFAMILY |
Lambda_DNA-bd_dom_sf (IPR010982) - T[278-355] 6.94E-20 |
| Pfam |
POU_dom (IPR000327) - T[283-355] 3.3E-29 |
| ProSitePatterns |
POU_dom (IPR000327) - T[296-308] . - T[323-336] . |
| PRINTS |
POU (IPR013847) - T[297-314] 5.0E-27 - T[323-336] 5.0E-27 - T[339-354] 5.0E-27 - T[369-389] 5.0E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PO4F2_HUMAN | 63.924 % | 193 | 1.33E-57 |
| PO4F3_HUMAN | 43.562 % | 216 | 2.06E-67 |
| PO4F1_HUMAN | 78.333 % | 192 | 2.32E-57 |