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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S119.g02293.01.t

Possible name(s)

RPUSD2; RPUSD3; RPUSD4

Location

S119 [13,498 / 18,048]

Sequences

Amino acid sequence

Length: 548

>Haaura.CG.MTP2014.S119.g02293.01.p
MVHNLEKSALKPLPASTFPRVKYHGSVVVVCKRKFTVKYCISSDKFDVIADSMIRIKSFS
SISRSNTCSLFCRYLRTRRPTLPENLTSSQSPSNKIEDEDILNLQSINTDRKHSAGNRFR
KEYNVNNTEERRDTESANVDLDITELKIEEIVKEKPKKYGIHIAEKMRREKKEKETGTAE
KNEKKSVRLKPTDISRWDTIEAAKYLRKRVLYADKQLVILNKPYGIPAHDGDSVNMSLKS
CLPVLSKMIYGINTSIPLHLCNRLDKGTTGITVCAVDKDLGHRISDLFREQKVRRKYWCV
TVGVPSPLQGIVDIPLKVCHVEARRKGRDHMRMVLAPEQKLDYNSGDLVQTRSRKMNVAL
THYQVLDSNGGLALVELQPFSTAKHQLRVHTADGLNSQILGDHKYSRSDDLAPQSLPQYV
LRRFDIRQARSRDMPLHLHLREILIPDVLEDQEKSNLLVSAKLSEHLYQTCQLFRLKPGS
STEFKYMPRIKKDAAGSKNPHIEELFVNPFADDDEQVSNELQQKDCYTVFKPRVKVRFQY
SSSEKTV*

Nucleotide sequence

Length: 1,644

>Haaura.CG.MTP2014.S119.g02293.01.t
ATGGTTCATAACTTAGAAAAATCTGCACTTAAACCTCTCCCTGCGTCTACGTTTCCACGG
GTCAAATATCACGGTTCAGTGGTTGTTGTATGTAAACGAAAATTTACTGTGAAGTACTGT
ATATCATCTGACAAATTCGATGTAATTGCAGACAGCATGATTAGAATTAAGAGCTTCTCA
TCTATTTCTCGCTCGAACACGTGTAGTTTATTCTGTCGATATTTGAGAACTCGACGGCCA
ACACTTCCCGAAAATTTGACCAGCAGTCAATCACCCTCGAATAAAATCGAAGATGAAGAC
ATCCTGAATCTGCAAAGCATTAATACAGATAGAAAGCATTCGGCTGGGAACCGATTTCGG
AAAGAATACAATGTAAACAATACAGAAGAACGAAGAGACACTGAAAGTGCAAATGTCGAT
CTGGACATAACAGAATTGAAGATAGAGGAGATAGTGAAAGAAAAACCCAAGAAATATGGA
ATTCACATTGCCGAAAAAATGCGCAGAGAAAAGAAGGAAAAAGAAACTGGTACTGCGGAG
AAAAATGAAAAAAAATCTGTGAGGCTCAAACCCACAGATATCAGCAGGTGGGATACGATC
GAGGCCGCTAAATATCTCAGAAAGAGAGTGCTGTATGCTGATAAACAACTTGTCATCTTG
AATAAACCGTACGGGATTCCCGCACATGATGGGGACTCCGTCAACATGAGCCTGAAATCC
TGTCTGCCAGTTCTATCTAAAATGATATATGGAATCAATACATCGATACCTTTGCATCTT
TGTAACAGACTTGACAAGGGAACGACTGGTATCACGGTCTGCGCTGTCGACAAGGATCTC
GGTCATCGAATATCTGATCTGTTCCGAGAGCAGAAAGTTCGTAGGAAATACTGGTGTGTT
ACTGTTGGTGTGCCTAGTCCACTTCAAGGAATTGTTGACATCCCGTTGAAAGTATGTCAT
GTAGAAGCTAGACGCAAAGGAAGGGATCATATGAGGATGGTCCTGGCACCAGAACAGAAA
CTAGACTATAATTCTGGTGACTTGGTTCAAACACGTTCCAGAAAGATGAACGTAGCACTG
ACCCATTATCAAGTACTGGATAGTAACGGCGGTCTCGCTTTGGTGGAACTGCAACCTTTT
TCAACTGCCAAACACCAGCTTCGTGTCCACACAGCAGACGGACTCAATTCTCAGATTCTT
GGCGATCACAAATACTCAAGAAGCGATGATCTCGCACCACAATCACTGCCACAGTATGTG
TTGCGAAGATTCGATATTCGGCAGGCAAGAAGTCGAGACATGCCTTTGCATTTGCATCTC
AGAGAAATTTTAATTCCAGATGTTCTTGAGGACCAAGAAAAATCGAACCTTTTAGTGTCT
GCCAAGTTATCAGAACACCTTTACCAGACCTGCCAGCTTTTTCGCCTGAAACCGGGATCC
TCAACCGAATTCAAGTACATGCCAAGAATAAAAAAGGATGCCGCTGGTTCGAAGAACCCT
CACATCGAGGAACTCTTCGTGAACCCATTCGCAGATGACGACGAACAGGTTTCAAATGAA
TTGCAGCAAAAAGACTGCTATACCGTTTTTAAACCCAGGGTGAAAGTAAGGTTTCAGTAC
AGTAGCAGTGAAAAGACAGTTTAG

InterProScan

SUPERFAMILY
PsdUridine_synth_cat_dom_sf (IPR020103) - T[205-320] 6.56E-38 - T[357-475] 6.56E-38
Pfam
PsdUridine_synth_RsuA/RluD (IPR006145) - T[217-392] 1.0E-24
CDD
PsdUridine_synth_RsuA/RluD (IPR006145) - T[217-419] 7.02848E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUSD4_HUMAN 41.667 % 245 3.6E-76