Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1181.g07809.01.t

Possible name(s)

CNOT7; CNOT8

Gene model

Haaura.CG.MTP2014.S1181.g07809

Location

S1181 [8,667 / 11,461]

Sequences

Amino acid sequence

Length: 298

>Haaura.CG.MTP2014.S1181.g07809.01.p
MPGQNAEDPIVEVWASNVDEEFKKIRKLVQRYPYVAMDTEFPGVVARPIGEFRSNSDYQY
QLLKCNVDLLKIIQLGLTFMNEKGDTPSNISTWQFNFTFSLNEDMYAQESIDLLHESGIQ
FKQHEDEGIEPLYFAELLMTSGIVLMDNVNWVSFHSGYDFGYLLKILTNSSLPAEENEFF
ELLKLFFPNIYDVKYLMKSCKNLKGGLQEVAQQLEIERIGPQHQAGSDSLLTGFTFFKMR
EDLVMFRTAIRTVRRNSTKTENCRKMKQIIQIWFYPLTHVVKFLHFNRMTEKNQKCRE

Nucleotide sequence

Length: 894

>Haaura.CG.MTP2014.S1181.g07809.01.t
ATGCCAGGACAGAATGCAGAGGATCCTATTGTGGAAGTATGGGCTTCCAATGTTGATGAA
GAATTCAAAAAGATAAGAAAGTTGGTTCAACGCTATCCCTATGTAGCAATGGACACAGAG
TTTCCTGGCGTTGTTGCTCGTCCCATTGGAGAATTTCGCAGCAATTCAGATTATCAGTAC
CAACTTCTCAAATGCAATGTTGACCTTTTAAAAATCATTCAGCTTGGCTTAACTTTTATG
AATGAGAAGGGGGACACCCCATCGAACATATCCACATGGCAGTTCAACTTCACTTTCAGT
CTCAATGAGGACATGTATGCTCAAGAATCGATAGATCTTCTACATGAGAGTGGGATTCAA
TTCAAGCAGCATGAAGATGAAGGAATTGAGCCCTTGTATTTTGCCGAACTTCTGATGACT
TCTGGTATAGTTCTAATGGACAATGTGAACTGGGTTTCCTTCCACAGTGGCTATGACTTT
GGGTACCTCCTCAAAATTCTGACAAATAGTAGTCTTCCAGCAGAAGAGAACGAATTTTTT
GAGCTGCTCAAGTTGTTTTTTCCCAATATCTATGACGTGAAGTACCTAATGAAGAGCTGC
AAGAATCTAAAGGGTGGGCTTCAGGAAGTAGCACAACAATTGGAGATCGAAAGAATAGGG
CCTCAGCACCAAGCTGGAAGTGACAGCCTACTCACTGGATTCACCTTTTTCAAAATGAGA
GAGGATCTAGTTATGTTCAGAACGGCAATCCGTACAGTGCGGAGGAATTCAACAAAAACT
GAAAACTGCCGCAAAATGAAGCAAATCATTCAAATTTGGTTTTACCCGTTGACACATGTC
GTAAAATTCCTACATTTTAACCGAATGACTGAGAAAAACCAGAAATGCCGTGAA

InterProScan

Gene3D	RNaseH_sf (IPR036397) - T[2-259] 2.9E-115
SUPERFAMILY	RNaseH-like_sf (IPR012337) - T[9-245] 2.63E-93
Pfam	RNase_CAF1 (IPR006941) - T[13-130] 9.0E-12 - T[152-236] 2.9E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNOT7_HUMAN	76.955 %	395	1.12E-139
CNOT8_HUMAN	72.84 %	381	5.44E-134