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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1153.g07745.01.t

Possible name(s)

DHRS13; RDH11; RDH12

Location

S1153 [4,795 / 7,603]

Sequences

Amino acid sequence

Length: 331

>Haaura.CG.MTP2014.S1153.g07745.01.p
MDLDISIISLLIVAILALWIKFIKTGPVCTNPALLTGKTVVVTGGNAGIGKATAIELAKR
KARVIIACRNEDKAMEALEEIKKESGSDLVHYMNLDIADFDSIKRFVDEWTKTEGRLDIL
INNAGTFNVGRTVQGYDLMFGTNQLGPFLLSNLLMPTIKKQAEQRPVRIVNLSSMGYKLG
KFDLSNLDPFCSISNPNSYQVFMQYNSTKLMNVYLTTELNKRLRTDNPESRSITTYAVHP
GAIRSQLGADYAESSMFSRSTRPIVFILVCRTVFYGCQTVLHCCISKGIENSSGKYFRDC
AVEELLPHATDPDLGKTLWEKSEQLTGIDS*

Nucleotide sequence

Length: 993

>Haaura.CG.MTP2014.S1153.g07745.01.t
ATGGATCTGGACATCAGCATTATTTCTTTACTGATTGTTGCTATCCTAGCATTATGGATA
AAATTCATCAAAACCGGACCAGTGTGTACGAATCCAGCCCTTCTCACTGGAAAAACCGTG
GTCGTAACCGGTGGGAACGCGGGCATCGGCAAGGCGACGGCTATTGAGCTCGCTAAGAGA
AAGGCGAGAGTCATAATCGCATGCCGAAATGAAGACAAAGCTATGGAAGCACTGGAAGAG
ATTAAAAAGGAAAGTGGTAGTGACCTAGTCCACTATATGAACCTTGACATTGCAGATTTT
GATAGCATCAAGAGATTTGTTGATGAATGGACAAAGACCGAAGGGAGGCTTGATATATTG
ATCAATAATGCTGGGACCTTCAATGTGGGTCGCACCGTACAAGGGTACGATCTTATGTTT
GGAACTAACCAACTTGGCCCATTCTTGCTGTCTAACTTACTGATGCCTACGATAAAAAAG
CAGGCCGAACAGAGGCCTGTCAGGATTGTCAATTTGTCTTCCATGGGATACAAACTCGGC
AAATTTGATCTCAGTAATTTGGATCCTTTCTGCTCTATTTCAAATCCAAATTCATATCAG
GTTTTTATGCAATATAACAGCACCAAGCTGATGAATGTATATTTAACTACGGAGCTGAAC
AAACGCTTGCGAACCGACAATCCAGAATCGAGATCAATCACGACTTATGCCGTTCACCCC
GGCGCTATCAGAAGTCAGCTGGGAGCAGATTATGCCGAATCCAGCATGTTTTCCCGCTCT
ACACGTCCGATAGTTTTCATACTCGTCTGTCGCACCGTTTTCTACGGATGTCAGACAGTC
CTTCATTGTTGTATTTCCAAAGGCATCGAGAATTCATCAGGAAAATACTTCAGGGATTGC
GCAGTAGAGGAACTTCTTCCTCATGCCACTGACCCAGATTTGGGAAAAACCCTGTGGGAA
AAAAGTGAGCAGTTAACTGGGATTGATAGTTGA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[35-303] 4.1E-50
Pfam
SDR_fam (IPR002347) - T[38-176] 1.2E-27
PRINTS
SDR_fam (IPR002347) - T[39-56] 1.3E-14 - T[115-126] 1.3E-14 - T[161-177] 1.3E-14 - T[231-248] 1.3E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 37.742 % 182 2.41E-55
DHR13_HUMAN 39.474 % 200 2.27E-61
RDH12_HUMAN 38.485 % 187 3.05E-57