- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S112.g02206.01.t
Possible name(s)
GATA3; GATA4; GATA6
Gene model
Location
S112 [17,282 / 27,983]
Amino acid sequence
Length: 811
>Haaura.CG.MTP2014.S112.g02206.01.p
SNQSMPMSANTMQPPTGVLPFTAHPYSSHQPYVHVYHPERVQAEISESNYSTLQTNTGDA
AGSGTPTESCENLSDRTASPQTHKDFITSRMSNTDLPRQMAEHAGNSPSAHDKAQWDQRT
YVTANSDGAMHDHYTEMDARIAANKYSPKSVSCLQSFTSPRKCAGSPIGDSGVEEDRGSD
VNSSANTINRSRTSLGGSSTGSAPSDQTSNYDVGSLRGGGVPSSRSYISSNFSSIESVSS
APTETHLQNIGPPALSYAQEYMTESTDDNRRILSYPSSMAHAVNYQRESGYGNPLYPGYQ
IPPNGGASGAHLNPFSHTLSYPATQTAGLIAEIPESQETISSLSHNPYPSCVGPSPELWS
GQPGSGYDTMAYPAGMAAAMRMQMTGSNLPTQYGYQDNRECVNCGSVATPLWRRDGTGHY
LCNACGLYRGGGQVRPTPLKNKGKLTSCRRQVCTNCRTTVTTLWRRSPDGSPVCNACGLY
QKLHGVARPPTMKKDSIQTRKRKPKGQGKGKKQANGKREISAVDSPVHNGFQQPSLQANT
KETSPISSSSASSLSLHNASGSSSASSALNYYHHGNSMAGDAVNLSLQYQHNTSIQSQRS
LSSGEGLGNNSVLASSGLDQTLGGRSSCSPPVEDDHTTANLGTSPSGAVSNVSTHSSNGL
RCSPDSDRYSPSHATAGHLAMYSNNVGLPRMAYPNGYALQASTIPLINSTDASSNYQSYS
LTIPGRQQSDGTVMPSSSANFHSAASFIDQPMIDTSGYRGLVATTGYHDSGSLYPASNSA
CGPTRLYRNTQHHHHPYSRPTYVKNESGLA*
Nucleotide sequence
Length: 2,433
>Haaura.CG.MTP2014.S112.g02206.01.t
AGCAATCAATCGATGCCCATGTCGGCCAACACGATGCAGCCCCCGACTGGGGTCCTTCCT
TTTACCGCTCACCCATATTCTTCTCATCAGCCGTATGTACACGTTTACCATCCTGAAAGA
GTGCAAGCGGAGATCTCGGAATCTAACTATTCAACACTGCAGACAAATACGGGTGACGCT
GCTGGTTCTGGTACTCCTACCGAGAGCTGTGAAAATTTGAGCGATCGAACAGCTAGTCCG
CAAACTCACAAAGACTTCATTACGAGCAGAATGAGTAACACCGATCTTCCACGTCAAATG
GCTGAACATGCAGGAAATTCGCCTTCAGCGCACGACAAAGCTCAATGGGATCAACGAACA
TATGTGACCGCCAACTCGGACGGTGCTATGCACGATCATTACACCGAAATGGACGCTCGC
ATAGCAGCCAATAAATATTCTCCAAAGTCGGTTTCATGCCTTCAGTCTTTTACCAGTCCG
AGAAAATGTGCTGGAAGTCCCATAGGTGATTCTGGTGTCGAAGAAGATAGAGGCTCCGAC
GTCAATAGCAGTGCAAATACTATCAATAGGAGTAGAACGAGCTTGGGCGGTAGCAGTACT
GGTAGCGCTCCCAGCGACCAGACTTCCAATTATGATGTTGGATCTTTGCGAGGTGGTGGT
GTCCCTTCATCTCGTAGCTACATTTCGTCCAACTTTTCATCAATAGAGTCAGTGTCATCT
GCTCCGACAGAAACGCATTTGCAAAATATCGGTCCACCAGCACTAAGCTATGCTCAAGAA
TACATGACAGAATCAACTGATGACAATAGACGTATATTGTCGTACCCGTCTAGCATGGCT
CATGCCGTCAACTACCAACGAGAATCGGGTTATGGGAACCCTCTTTATCCCGGTTACCAG
ATTCCTCCGAACGGAGGTGCGTCGGGAGCTCACCTCAACCCATTTTCTCACACACTGTCT
TATCCGGCCACGCAAACAGCCGGACTAATAGCGGAAATTCCGGAGTCTCAAGAAACCATT
TCGTCGTTGAGCCACAATCCCTATCCGTCCTGTGTCGGACCTTCTCCCGAACTGTGGTCC
GGACAGCCAGGCTCTGGCTACGATACCATGGCGTATCCAGCCGGGATGGCAGCCGCCATG
CGAATGCAAATGACAGGTTCAAATCTGCCGACGCAATACGGTTATCAAGACAATCGTGAA
TGCGTTAATTGTGGATCAGTAGCAACTCCATTGTGGCGACGAGACGGTACTGGTCATTAC
CTATGCAACGCATGTGGACTTTACCGAGGTGGCGGACAAGTTAGACCTACGCCACTGAAG
AATAAAGGGAAATTGACCTCTTGTAGACGTCAGGTATGCACAAACTGCAGAACAACCGTA
ACCACACTTTGGCGCCGGAGTCCGGATGGGAGTCCTGTCTGCAATGCATGCGGCTTGTAT
CAGAAATTGCATGGAGTAGCAAGACCCCCTACTATGAAGAAAGACAGCATTCAGACCAGA
AAAAGAAAGCCCAAAGGTCAAGGTAAAGGCAAAAAACAAGCGAACGGAAAGCGAGAAATT
TCTGCCGTAGATTCGCCCGTGCACAACGGATTCCAACAGCCATCGTTGCAAGCAAATACG
AAAGAAACTTCGCCTATTTCGTCATCGTCTGCCTCGTCGTTATCCCTGCATAACGCGAGC
GGGAGCAGTAGTGCCTCTAGCGCCCTCAACTACTATCACCACGGCAACAGCATGGCAGGT
GATGCGGTGAACCTTAGCTTACAGTACCAGCATAACACAAGCATTCAAAGTCAACGTAGC
TTGTCCAGTGGCGAAGGACTTGGAAATAATTCGGTACTTGCTTCATCGGGCCTCGATCAA
ACCCTCGGCGGGAGATCGAGCTGTTCTCCTCCGGTGGAAGACGATCACACCACCGCCAAT
TTGGGAACTTCGCCCTCGGGAGCCGTAAGTAACGTGTCGACTCATTCTTCCAATGGTCTT
AGATGTTCACCAGATTCAGATCGGTACAGTCCTTCACATGCCACTGCGGGACATCTAGCA
ATGTATTCCAATAATGTAGGATTACCTCGGATGGCCTACCCGAATGGATACGCGTTGCAA
GCCAGTACGATCCCGCTAATCAATTCGACCGATGCTTCGAGCAATTACCAAAGTTATTCA
CTAACTATTCCCGGTCGTCAACAGAGTGATGGTACGGTGATGCCCTCGTCCAGTGCCAAT
TTTCATTCGGCAGCCAGCTTTATAGATCAGCCTATGATAGATACATCGGGCTATAGAGGA
CTTGTAGCTACAACGGGATATCACGATAGTGGGTCCCTTTATCCGGCGTCCAATTCTGCT
TGCGGGCCCACGCGCCTTTATCGCAATACACAACACCATCATCATCCGTACTCAAGACCT
ACTTACGTGAAAAACGAATCGGGTTTAGCATGA
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[394-443] 1.3E-17 - T[448-513] 6.0E-26 |
| SMART |
Znf_GATA (IPR000679) - T[395-444] 9.8E-12 - T[447-497] 3.3E-21 |
| ProSiteProfiles |
Znf_GATA (IPR000679) - T[395-449] 20.983 - T[453-500] 25.928 |
| PRINTS |
Znf_GATA (IPR000679) - T[397-414] 1.1E-10 - T[415-432] 1.1E-10 |
| ProSitePatterns |
Znf_GATA (IPR000679) - T[401-425] . - T[453-477] . |
| Pfam |
Znf_GATA (IPR000679) - T[401-428] 7.4E-11 - T[453-486] 9.3E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GATA6_HUMAN | 65.254 % | 162 | 2.8E-42 |
| GATA4_HUMAN | 61.789 % | 164 | 1.07E-43 |
| GATA3_HUMAN | 50 % | 155 | 8.37E-41 |