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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S110.g02188.02.t

Possible name(s)

RIC1

Gene model

Haaura.CG.MTP2014.S110.g02188

Location

S110 [93,575 / 99,267]

Sequences

Amino acid sequence

Length: 997

>Haaura.CG.MTP2014.S110.g02188.02.p
MYFPLGWPKILCQSKDEKSYMKFISCNRYRMLFVVLTEETVSIWHCRPLVEILHYKRSQS
SIEKAGKNEIAEWRHDSSMLALVTNTGFLLIFRLEQDIKSETGINLYEYRQNKSAHSENS
DGIPALRLCLKASIQYSSTITSLSCINDDILISTSNGELELIPWLEIPSARKLVNIQDIP
FSVDFQSAGSALRSKHTIFINQLTYSPCLDGFTAVFNDGRAALVVVSNTSIEKEKNVSWK
CHGVWAPGLTKAVCNAVNNRYRLMAFGTSRGSCEVFSLDDVSGSLQFSHQMALTPKYYPD
VYRNTGSVLDMKWSPDGCALAMSWSNGGFSLWSVYGACLLCTLNTDHAFTADGCRKEQSL
FYSMCWGAEGYQLWILQKHHMELHKSSSAKDFSLVYCDKCDMVTRNHSVCKSGYDLLGST
SSLSDDGFIEPVELSEKTESDNEQSNASSSHSNGFCPVLNELVQMQFAKSALTMNPCRGN
HSHIILQAEDRIISSFGDKNNAMPSSIKPTNLDFNLLSSSQQSTVKTPDRTFENVVGNKQ
WNVMQMPLNYLNGNWPIRFTSIDKAGQLLAIAGNFGLAHYSLVTKKWKLFGNVMQEKDMV
VTGGLTWWRGLIIVACFNLVSTQDELRIYPNNTNLDNVFSYTKKVHSQVLLINVYMDTLI
TFDAACYIRLYRIEPDDKIQYKSARLSVIREISMARFVSFPSLVISVTMASLHMDSGGRK
HSSLEQETEVLIINVAGRLLLLQPSLGEYGNQGENASVNLSFSKDMNFHPPIVLASSVEN
VWTTELKNSQKVHLTDALWLGCGSAGLRVWLPLFPPSRRAQTGGIGEHDIQVLLSKRITV
TLEVDTCYPLTVLFENAVVLGAKTESFHYQKTLANSNSSFLSVERSCEIYLHQILRQLLR
RNLGYHALQVAASCQSHSYFPHVLELMLHKVLEEEATASEPIPDPFLPTIVKFIAEFPEY
LETIVHCARKTEIALWQYLFSYVGNPXIYLELKISTG

Nucleotide sequence

Length: 2,991

>Haaura.CG.MTP2014.S110.g02188.02.t
ATGTATTTTCCTCTTGGGTGGCCAAAAATCCTGTGTCAAAGCAAGGATGAAAAATCTTAT
ATGAAGTTCATATCTTGCAACCGTTATCGCATGCTCTTTGTTGTTTTGACGGAAGAAACT
GTGAGCATTTGGCATTGTCGTCCTCTGGTAGAAATACTTCATTATAAAAGAAGCCAATCC
TCAATAGAAAAAGCTGGTAAAAATGAAATTGCGGAATGGAGGCATGATAGCAGTATGCTG
GCTTTGGTTACAAATACTGGATTCTTGCTCATATTCCGACTAGAACAGGACATAAAGTCT
GAAACTGGAATAAACCTGTATGAGTACAGACAAAATAAGAGTGCTCACAGTGAAAATTCT
GATGGAATACCTGCTCTGAGATTATGCTTGAAAGCCAGTATTCAATACAGCTCCACCATA
ACCAGTTTATCATGCATCAATGATGATATCTTGATATCCACAAGCAATGGAGAATTGGAA
TTAATACCCTGGCTTGAAATTCCGTCTGCAAGAAAATTGGTTAATATTCAAGACATACCT
TTTTCAGTTGATTTTCAGAGCGCAGGCTCCGCACTTCGAAGTAAGCACACTATCTTCATA
AACCAGCTAACTTATAGCCCCTGTTTGGATGGTTTCACTGCTGTTTTTAATGACGGCCGT
GCAGCCCTTGTTGTTGTTTCGAATACCTCTATTGAAAAAGAAAAAAATGTGTCCTGGAAA
TGTCATGGTGTCTGGGCACCTGGTTTGACAAAAGCTGTTTGCAATGCTGTGAATAATCGT
TATCGATTGATGGCGTTCGGAACATCAAGGGGTAGCTGTGAGGTGTTTAGCTTGGATGAT
GTTTCAGGATCTTTACAATTTTCACACCAGATGGCATTGACTCCAAAGTATTATCCTGAT
GTCTACAGAAATACAGGTTCTGTCTTGGACATGAAATGGTCTCCCGATGGATGTGCACTA
GCAATGTCTTGGTCAAATGGCGGTTTTTCATTATGGAGTGTGTATGGAGCATGTCTTCTG
TGCACTTTGAACACTGATCATGCGTTTACAGCAGATGGATGTCGTAAAGAACAATCATTG
TTTTATTCTATGTGCTGGGGTGCAGAAGGTTACCAGTTATGGATTCTCCAGAAACATCAC
ATGGAATTGCATAAAAGCTCTTCGGCAAAAGACTTTTCGTTAGTGTACTGTGATAAATGT
GATATGGTGACAAGAAATCACTCTGTCTGTAAATCTGGATACGACTTGCTTGGCAGCACA
TCCTCCTTAAGTGACGATGGCTTTATTGAACCAGTGGAATTGTCAGAGAAAACTGAAAGT
GACAATGAACAAAGCAATGCATCCTCTTCACACAGCAATGGTTTCTGTCCTGTCTTAAAT
GAACTAGTTCAGATGCAATTCGCCAAAAGTGCTTTGACGATGAATCCATGTAGGGGAAAT
CATTCTCACATCATACTCCAGGCTGAGGACAGAATAATCTCAAGTTTTGGTGATAAAAAT
AATGCAATGCCCAGCTCAATAAAACCAACAAATTTGGATTTCAATCTGCTGTCATCATCT
CAGCAATCAACCGTAAAAACACCAGACAGAACTTTTGAAAACGTAGTTGGAAATAAGCAG
TGGAATGTGATGCAAATGCCTCTCAACTATCTAAATGGGAATTGGCCTATACGATTTACC
TCGATTGACAAAGCTGGCCAGTTGTTAGCTATAGCTGGTAATTTTGGTCTCGCGCATTAC
TCTTTAGTGACCAAGAAATGGAAGCTTTTTGGAAATGTAATGCAAGAAAAGGATATGGTC
GTTACAGGTGGCCTTACTTGGTGGAGAGGTTTGATCATAGTGGCATGCTTCAACTTGGTT
TCTACTCAGGATGAACTAAGGATATATCCGAACAACACAAATTTGGACAATGTTTTTTCT
TATACAAAGAAAGTTCATTCCCAGGTTCTGTTGATAAATGTGTATATGGACACACTTATC
ACTTTTGATGCAGCATGCTATATCCGACTATATAGAATTGAACCGGATGATAAAATACAG
TATAAAAGTGCCCGACTGTCAGTCATACGTGAGATATCTATGGCTCGCTTTGTGTCTTTC
CCATCTCTTGTTATATCTGTTACAATGGCTTCGCTGCATATGGACAGTGGGGGAAGAAAA
CATTCTTCTCTTGAGCAGGAAACTGAAGTGTTGATTATTAATGTTGCAGGAAGACTGCTT
TTACTTCAGCCCAGTCTGGGGGAATATGGTAATCAAGGTGAAAATGCTTCCGTCAATTTA
TCATTTTCAAAAGATATGAATTTCCATCCACCTATTGTCTTGGCATCTTCTGTTGAAAAT
GTTTGGACAACTGAGTTAAAAAACAGCCAAAAAGTTCATTTGACCGATGCTCTTTGGCTG
GGTTGTGGCTCCGCTGGACTGCGTGTATGGCTTCCTCTCTTTCCGCCGTCTCGGCGTGCA
CAGACCGGCGGGATAGGAGAACATGATATTCAAGTGTTACTCTCCAAACGTATTACTGTT
ACACTAGAAGTTGACACATGTTACCCTTTGACAGTATTGTTCGAAAACGCTGTTGTTCTT
GGTGCTAAAACAGAATCATTCCATTACCAAAAAACTCTTGCCAACAGTAACAGCTCATTT
TTAAGTGTTGAAAGATCTTGTGAAATTTACCTGCATCAGATTCTAAGACAACTTCTGCGG
CGTAATCTTGGATACCATGCACTCCAAGTTGCCGCCTCTTGCCAATCACATTCGTACTTT
CCTCATGTTCTTGAACTCATGCTGCACAAGGTTCTAGAGGAGGAAGCTACAGCATCTGAA
CCAATCCCTGATCCTTTTTTGCCAACCATTGTTAAGTTCATTGCGGAATTTCCTGAGTAC
CTGGAAACTATAGTACATTGTGCAAGAAAAACAGAGATTGCTCTGTGGCAGTATTTATTC
AGCTATGTTGGCAATCCAANCATCTACCTAGAGCTAAAAATAAGCACGGGT

InterProScan

SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[30-94] 1.89E-13 - T[132-370] 1.89E-13
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[72-337] 4.1E-7
Pfam
Ribosome_control_1 (IPR009771) - T[794-991] 8.6E-53

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RIC1_HUMAN 45.255 % 482 1.75E-150