Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S110.g02188.01.t

Possible name(s)

RIC1

Location

S110 [93,575 / 99,267]

Sequences

Amino acid sequence

Length: 948

>Haaura.CG.MTP2014.S110.g02188.01.p
MYFPLGWPKILCQSKDEKSYMKFISCNRYRMLFVVLTEETVSIWHCRTNTGFLLIFRLEQ
DIKSETGINLYEYRQNKSAHSENSDGIPALRLCLKASIQYSSTITSLSCINDDILISTSN
GELELIPWLEIPSARKLVNIQDIPFSVDFQSAGSALRSKHTIFINQLTYSPCLDGFTAVF
NDGRAALVVVSNTSIEKEKNVSWKCHGVWAPGLTKAVCNAVNNRYRLMAFGTSRGSCEVF
SLDDVSGSLQFSHQMALTPNVYFHSGSVLDMKWSPDGCALAMSWSNGGFSLWSVYGACLL
CTLNTDHAFTADGCRKEQSLFYSMCWGAEGYQLWILQKHHMELHKSSSAKDFSLVYCDKC
DMVTRNHSVCKSGYDLLGSTSSLSDDGFIEPVELSEKTESDNEQSNASSSHSNGFCPVLN
ELVQMQFAKSALTMNPCRAEDRIISSFGDKNNAMPSSIKPTNLDFNLLSSSQQSTVKTPD
RTFENVVGNKQWNVMQMPLNYLNGNWPIRFTSIDKAGQLLAIAGNFGLAHYSLVTKKWKL
FGNVMQEKDMVVTGGLTWWRGLIIVACFNLVSTQDELRIYPNNTNLDNVFSYTKKVHSQV
LLINVYMDTLITFDAACYIRLYRIEPDDKIQYKSARLSVIREISMARFVSFPSLVISVTM
ASLHMDSGGRKHSSLEQETEVLIINVAGRLLLLQPSLGEYGNQGENASVNLSFSKDMNFH
PPIVLASSVENVWTTELKNSQKVHLTDALWLGCGSAGLRVWLPLFPPSRRAQTGGIGEHD
IQVLLSKRITVTLEVDTCYPLTVLFENAVVLGAKTESFHYQKTLANSNSSFLSVERSCEI
YLHQILRQLLRRNLGYHALQVAASCQSHSYFPHVLELMLHKVLEEEATASEPIPDPFLPT
IVKFIAEFPEYLETIVHCARKTEIALWQYLFSYVGNPXIYLELKISTG

Nucleotide sequence

Length: 2,844

>Haaura.CG.MTP2014.S110.g02188.01.t
ATGTATTTTCCTCTTGGGTGGCCAAAAATCCTGTGTCAAAGCAAGGATGAAAAATCTTAT
ATGAAGTTCATATCTTGCAACCGTTATCGCATGCTCTTTGTTGTTTTGACGGAAGAAACT
GTGAGCATTTGGCATTGTCGTACAAATACTGGATTCTTGCTCATATTCCGACTAGAACAG
GACATAAAGTCTGAAACTGGAATAAACCTGTATGAGTACAGACAAAATAAGAGTGCTCAC
AGTGAAAATTCTGATGGAATACCTGCTCTGAGATTATGCTTGAAAGCCAGTATTCAATAC
AGCTCCACCATAACCAGTTTATCATGCATCAATGATGATATCTTGATATCCACAAGCAAT
GGAGAATTGGAATTAATACCCTGGCTTGAAATTCCGTCTGCAAGAAAATTGGTTAATATT
CAAGACATACCTTTTTCAGTTGATTTTCAGAGCGCAGGCTCCGCACTTCGAAGTAAGCAC
ACTATCTTCATAAACCAGCTAACTTATAGCCCCTGTTTGGATGGTTTCACTGCTGTTTTT
AATGACGGCCGTGCAGCCCTTGTTGTTGTTTCGAATACCTCTATTGAAAAAGAAAAAAAT
GTGTCCTGGAAATGTCATGGTGTCTGGGCACCTGGTTTGACAAAAGCTGTTTGCAATGCT
GTGAATAATCGTTATCGATTGATGGCGTTCGGAACATCAAGGGGTAGCTGTGAGGTGTTT
AGCTTGGATGATGTTTCAGGATCTTTACAATTTTCACACCAGATGGCATTGACTCCAAAT
GTATATTTTCATTCAGGTTCTGTCTTGGACATGAAATGGTCTCCCGATGGATGTGCACTA
GCAATGTCTTGGTCAAATGGCGGTTTTTCATTATGGAGTGTGTATGGAGCATGTCTTCTG
TGCACTTTGAACACTGATCATGCGTTTACAGCAGATGGATGTCGTAAAGAACAATCATTG
TTTTATTCTATGTGCTGGGGTGCAGAAGGTTACCAGTTATGGATTCTCCAGAAACATCAC
ATGGAATTGCATAAAAGCTCTTCGGCAAAAGACTTTTCGTTAGTGTACTGTGATAAATGT
GATATGGTGACAAGAAATCACTCTGTCTGTAAATCTGGATACGACTTGCTTGGCAGCACA
TCCTCCTTAAGTGACGATGGCTTTATTGAACCAGTGGAATTGTCAGAGAAAACTGAAAGT
GACAATGAACAAAGCAATGCATCCTCTTCACACAGCAATGGTTTCTGTCCTGTCTTAAAT
GAACTAGTTCAGATGCAATTCGCCAAAAGTGCTTTGACGATGAATCCATGTAGGGCTGAG
GACAGAATAATCTCAAGTTTTGGTGATAAAAATAATGCAATGCCCAGCTCAATAAAACCA
ACAAATTTGGATTTCAATCTGCTGTCATCATCTCAGCAATCAACCGTAAAAACACCAGAC
AGAACTTTTGAAAACGTAGTTGGAAATAAGCAGTGGAATGTGATGCAAATGCCTCTCAAC
TATCTAAATGGGAATTGGCCTATACGATTTACCTCGATTGACAAAGCTGGCCAGTTGTTA
GCTATAGCTGGTAATTTTGGTCTCGCGCATTACTCTTTAGTGACCAAGAAATGGAAGCTT
TTTGGAAATGTAATGCAAGAAAAGGATATGGTCGTTACAGGTGGCCTTACTTGGTGGAGA
GGTTTGATCATAGTGGCATGCTTCAACTTGGTTTCTACTCAGGATGAACTAAGGATATAT
CCGAACAACACAAATTTGGACAATGTTTTTTCTTATACAAAGAAAGTTCATTCCCAGGTT
CTGTTGATAAATGTGTATATGGACACACTTATCACTTTTGATGCAGCATGCTATATCCGA
CTATATAGAATTGAACCGGATGATAAAATACAGTATAAAAGTGCCCGACTGTCAGTCATA
CGTGAGATATCTATGGCTCGCTTTGTGTCTTTCCCATCTCTTGTTATATCTGTTACAATG
GCTTCGCTGCATATGGACAGTGGGGGAAGAAAACATTCTTCTCTTGAGCAGGAAACTGAA
GTGTTGATTATTAATGTTGCAGGAAGACTGCTTTTACTTCAGCCCAGTCTGGGGGAATAT
GGTAATCAAGGTGAAAATGCTTCCGTCAATTTATCATTTTCAAAAGATATGAATTTCCAT
CCACCTATTGTCTTGGCATCTTCTGTTGAAAATGTTTGGACAACTGAGTTAAAAAACAGC
CAAAAAGTTCATTTGACCGATGCTCTTTGGCTGGGTTGTGGCTCCGCTGGACTGCGTGTA
TGGCTTCCTCTCTTTCCGCCGTCTCGGCGTGCACAGACCGGCGGGATAGGAGAACATGAT
ATTCAAGTGTTACTCTCCAAACGTATTACTGTTACACTAGAAGTTGACACATGTTACCCT
TTGACAGTATTGTTCGAAAACGCTGTTGTTCTTGGTGCTAAAACAGAATCATTCCATTAC
CAAAAAACTCTTGCCAACAGTAACAGCTCATTTTTAAGTGTTGAAAGATCTTGTGAAATT
TACCTGCATCAGATTCTAAGACAACTTCTGCGGCGTAATCTTGGATACCATGCACTCCAA
GTTGCCGCCTCTTGCCAATCACATTCGTACTTTCCTCATGTTCTTGAACTCATGCTGCAC
AAGGTTCTAGAGGAGGAAGCTACAGCATCTGAACCAATCCCTGATCCTTTTTTGCCAACC
ATTGTTAAGTTCATTGCGGAATTTCCTGAGTACCTGGAAACTATAGTACATTGTGCAAGA
AAAACAGAGATTGCTCTGTGGCAGTATTTATTCAGCTATGTTGGCAATCCAANCATCTAC
CTAGAGCTAAAAATAAGCACGGGT

InterProScan

SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[28-54] 8.61E-12 - T[96-330] 8.61E-12
Pfam
Ribosome_control_1 (IPR009771) - T[745-942] 7.9E-53

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RIC1_HUMAN 44.79 % 468 1.23E-145