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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1062.g07506.01.t

Possible name(s)

ZNF343; ZNF345; ZNF467

Location

S1062 [26,809 / 29,359]

Sequences

Amino acid sequence

Length: 387

>Haaura.CG.MTP2014.S1062.g07506.01.p
MLATSTQPGMFPVVSGNNPLTLVHTHPLPGSTTVSVQSLNTLPSTSNNDMVPVTIGEGVG
IKKHFLCTYCNKAFGSRYNATRHEKGCKLAPPEMSQQNESSPVACPNCGKQFASQDGVNR
HLKKKCKMGGQYIENGPSRSWPTKKVHMCKYCGKQFSTKWNAIRHENLFHSNDEPVIPPM
TITVPTTTQLHYIHKKPERFCRFCGNYFSTKYNAIRHERICTRVTGTGYTQLVIPSTTDA
KISASVQVVSSQQVNQQQIQTQPTTNNQQQQLQQPVVHVQQQQQQQQQQQQQQQQRQQRT
QVQHVSQQIQQIQVQQVQQQQVQQVQQQVRQQQEVQQNNTIHQQLQQIQQRAAAAQQLQQ
QTQQLQQQQQQQQQQQQHHIVPVCQI*

Nucleotide sequence

Length: 1,950

>Haaura.CG.MTP2014.S1062.g07506.01.t
ATGCTTGCCACGTCGACACAGCCAGGCATGTTCCCTGTCGTGTCAGGAAACAACCCTCTT
ACCCTAGTACACACTCACCCCCTGCCTGGATCGACGACGGTGTCGGTCCAGTCTTTAAAC
ACCCTCCCATCCACATCGAACAATGACATGGTACCTGTAACCATTGGAGAAGGGGTCGGA
ATTAAAAAACATTTTCTCTGCACCTACTGTAACAAAGCTTTCGGCTCCCGGTACAACGCT
ACGCGACACGAGAAGGGGTGCAAGTTGGCACCGCCTGAAATGAGCCAACAAAACGAAAGC
AGCCCGGTGGCTTGCCCCAACTGTGGAAAACAGTTTGCTTCCCAGGACGGGGTCAACAGG
CACCTTAAGAAAAAATGCAAGATGGGAGGCCAGTACATTGAAAATGGCCCGTCACGAAGC
TGGCCCACAAAAAAAGTTCACATGTGCAAATACTGCGGAAAACAATTTAGCACCAAGTGG
AACGCGATCCGTCACGAAAATCTCTTTCACAGCAATGACGAGCCCGTCATACCACCCATG
ACAATCACGGTGCCGACCACGACTCAGTTGCATTACATTCACAAAAAGCCAGAACGGTTT
TGTCGCTTTTGCGGCAACTACTTCAGCACAAAGTACAATGCAATCCGTCACGAGAGGATA
TGTACCCGTGTGACGGGAACCGGCTACACCCAACTGGTAATCCCCAGCACCACAGACGCA
AAAATTTCTGCCTCGGTGCAAGTGGTTTCGTCCCAGCAGGTGAATCAGCAGCAAATTCAA
ACACAGCCTACGACAAACAATCAACAACAGCAATTGCAGCAGCCGGTTGTACATGTGCAA
CAACAACAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAACAGAGACAGCAGAGAACC
CAAGTACAACATGTATCGCAGCAGATCCAGCAGATTCAAGTACAGCAAGTACAACAGCAA
CAGGTACAGCAGGTGCAACAGCAAGTGCGGCAACAACAGGAGGTTCAACAAAATAATACA
ATACATCAACAACTCCAGCAAATTCAACAAAGAGCAGCCGCAGCTCAACAGCTGCAGCAG
CAAACTCAGCAACTCCAACAACAACAACAGCAGCAGCAGCAGCAACAACAGCATCATATA
GTTCCCGTTTGTCAGATCTAACATACAATTTTTCTTCAGCAACAAACCCAACAAATTCAT
ATCAGCCCACAAGTCGTGTTCGTTAGCCCGTACCATGTATGTAAATTTTGCAACAAACAA
CTCGATACAAAGTGCGACCCAACTCCTGTGCTGCGCGAGGAGCTTCAAAACGGCTCCCTG
GCCGCCGCAACATTGCAAGTGCAAGCTCCCATCACCCCAACGATTATAACGGGGTCGTCA
GTGCCGATGATCGCAACTCTGCCTACTCAAAACATCACAATTCCGATTCAACAACCGTCG
CAAGCACAACAGCAGCAGCAGCAGCAGCAGACTTCCCAGCAGCATGTACAGCAACAACAA
ATCCAGCAGAACCAAGTCACCCAGCAGACCCCACCAGGGCAGTCCCTCATCTCTACTAAC
CAACAGAAACCCCACGGCTGTCAGTTTTGCAACAAGCATTTCGCCACCAAGTGGTATTTA
GACCAGCACGAGAAAATCCACACGGGCCAGGCCGTGACCTGCAAGGTCTGTAACAAGTCG
TTCGTCACAAGATGGCACCTCGAGAAACACGTCAGGGTTCATATGCCGGGAGCCAAGAAA
AACAAAAGGGACTCGGGCTCCAGTCCCATGGGCCAGGCCTCGTTCCGCCAGCCCCTTCTT
ACCGAGGAGGGACTGCAACATGCCGCTCTCGACAGAAGTCGAGAAGAGTTGGTAGTTTCT
GTTCCTTATTCTTTGTCCTCTGATCGATCCCAAATGTCGCAGATTACTATTACAACCTTA
TCCCAGCCGGCGCCTTCTGTAGCAAAATAA

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[63-123] 1.05E-6 - T[145-220] 7.01E-6
SMART
Znf_C2H2_type (IPR013087) - T[65-85] 56.0 - T[103-123] 24.0 - T[147-170] 0.53
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[147-175] 12.154
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[149-170] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value