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TRANSCRIPT CARD

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  1. Molecular Tool 'Xenopus Chordin RNA' > 
  2. Molecular Tool 'Ets1/2 modified mRNA' > 
  3. Transcript 'Haaura.CG.MTP2014.S1...' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1026.g07426.01.t

Possible name(s)

STX10; STX6

Gene model

Haaura.CG.MTP2014.S1026.g07426

Location

S1026 [4,287 / 19,656]

Sequences

Amino acid sequence

Length: 189

>Haaura.CG.MTP2014.S1026.g07426.01.p
MSVEDPFFVVKSEVEKSVTNCKTLQERWRSLLSDIGPGKRDQYERVANELRNNIRSIEWD
LEDLEETIGIVQANPRKFRISSAELLERNSFIAETRQNINDMKEEMSSPEVKSVLENMTR
KTLLRNGLTNDNYGSQRHTTIEVQHHGDESESFIQGNQQQQRLIIEQQDDQLELVADSVG
ILKNMSRYV

Nucleotide sequence

Length: 567

>Haaura.CG.MTP2014.S1026.g07426.01.t
ATGTCTGTGGAGGATCCATTCTTCGTTGTGAAAAGTGAGGTTGAGAAGTCCGTGACCAAT
TGCAAAACCCTCCAGGAGCGCTGGAGATCTCTTCTCTCCGACATCGGACCAGGAAAACGG
GACCAGTACGAACGTGTCGCTAACGAACTGAGAAACAATATTCGGAGTATAGAATGGGAT
TTGGAAGATCTCGAGGAAACAATTGGTATCGTCCAAGCGAACCCGCGAAAATTTAGAATC
TCATCGGCGGAACTCCTGGAGCGGAACTCGTTCATTGCCGAGACGAGACAAAACATAAAC
GATATGAAAGAGGAAATGTCGAGTCCGGAAGTAAAATCAGTGCTTGAAAATATGACAAGA
AAGACCTTATTACGTAACGGACTTACGAACGATAATTACGGTTCTCAGCGACACACGACC
ATCGAAGTTCAGCATCACGGTGATGAAAGCGAAAGTTTTATTCAGGGTAATCAACAGCAA
CAAAGATTGATAATTGAACAGCAAGATGATCAGCTTGAACTCGTTGCAGACAGTGTTGGA
ATATTGAAAAATATGTCCAGGTATGTA

InterProScan

SUPERFAMILY
SNARE (IPR010989) - T[4-108] 1.41E-29
Pfam
Syntaxin-6_N (IPR015260) - T[5-103] 4.0E-31

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
STX6_HUMAN 47.959 % 177 2.55E-56
STX10_HUMAN 41.579 % 147 1.73E-44