- Transcript 'Boleac.CG.SB_v3.S298...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1002.g07357.01.t
Possible name(s)
KATNB1; NWD1; NWD2
Gene model
Location
S1002 [3,307 / 14,866]
Amino acid sequence
Length: 1,987
>Haaura.CG.MTP2014.S1002.g07357.01.p
MRPKPDRSKEDNLSCLPPIWNISTKVERPNTDRILNRRSDARKNLSYKNDQKIIEHLRQK
LNRKDESNLSASWIASQRNDQATKSVHRDMSPEKTCIITERMNSHIAMNGTTSSSMSKGT
SRRTLSPYDSMNSQLVLPSIVIDEHDSVFYEEQDAPAASDVVARTISTPGIFVDWKSDDS
SDFEEVFRSEEEFTESNASDIHVSLESRNAQKIGRNGSESKSSGKEVLHSVVMGNIYQNL
PELSKKVKIYLSHGGINTETEQKIFMTEVFPRISQLCRGLGLSFEVVDVGYEAAGTKIAI
HYMLDALETSLGTAFVSFISDESDAESEAPPKFVPSDVMTKIFNIIQLEIVATEASICCR
RTNQLPVSGTDQAEPKALLDILEKKVEHCQGNRELILKRYDLDSNAIPEEFVLRQSISSP
LETVKLCLALKTYSKRLHADPSVRKWRDHALRTSSSRENLTALNESKDPRNNCVWFCQKQ
SGMKGSIPSEVRSKNSREVTLKSTLKSRLSCNNLQTYQLVKNEESQTNWNEGKKSDLEKI
KHKQSEKFSFDIYNTISLQVKRALEAEENNSTITKDNYELIEHVRFMGEANRNFIGREDV
LEEIKNYILSDGKRSPMVLYGEPGCGKTSVLCAAAKQCRIWVNNGTKLPPIGMHRHARPS
VVAANFHKKIQQHIVIFRSVGVTGETKSLTFLIRDITRQLEAIYKTRREEDNISHQRLFS
DLPSHSLSNLAAFLSRHRQYVLLFIDNLSAATDVKDRYSLSWLPKPLPKYFKVIFSFTCK
GKIDPGACEISTPKSLFEACLKHYKDDLYLVAIPPLAFQETLQSVDFGRPTKGLDLLLSF
LCQNERRITKEQQRVIMKTANSCTTPLALKLLVGIARHWKSYTPRENVINDMSGWGSHIR
DFICHFLSVVASKHNQNVFKAFTCFITCSKNGLTHQEIVDLISMDKKVTRLLLGGRIAVP
QVKEDSNTSRSKSRKDNKTVKVISSGRCDTVCQITGMWYLLRQDLEPFLMETLTDNVKTI
KWRHAIFAEQIMKMFMSEPKDLRHFHVIMTSYFSNEPTQCICGSIHDCGQPLQWSVGSHT
TLNLRRLSESIFHARLCADIEPIKRKMIFDLNWLQAKLDATSIECLLSDIYEVLKMVSND
KDINLLVEALFLSQDVLRHDPRELPSQLLGRLHDIIEKDVPLAPQDPRLYPYTRLLLSQI
RRSKRYFLMPTKTCLTSGKQIIFDPLHGSDDVITALVSCTDGQRIVTAAKDSTIKMWDII
SRRVLRTIENVGRDVIAMCVCMGNYFVATLHRNSQVNVWSFRQCSCIFSISCYTNEDRLL
ITIVSDGQLLATLSQKSMTMRVWDLDKLCFTREVSIGSEEVDVRNLTVARNSRGNNVFLG
YLGHSEAITVNAKRGKIVRTIKCKDGRITQVESSRDYYIIGCRKKQMEVHELQHFYLHDS
INYGLVRVIKACVDDTIYDMFVNRLGSHLIGLSLNVDGESEIVVWSMENDAHRHMVKNKG
KFIAGTCIDLQYCITAGESENVVRIHNLAAQFDKHTHSRTQVKKKVDGIGRLFNLPEKDK
YVVAQGIGGSPITVWNVTRSKCRGEAVIIERGLLDKHDIVIVKDMLVVILSDRGIATIRS
RSENIFETIYVYNLLLRKYERKLHPVQINMCPPDQYHVIGNDKLIGTSSDHLHLVVWSII
TGKILYTILPDFSCYQQEEKILHDKKRRQRPKLRNYSMVPFQQKNTDAKRTTWKKYRVTK
EEQQQAIFEMVVSGDESILLCSYYSRHIVVFNLKTRLHKLTLTDKHSILNLHKAILATDG
KHLLMTNYDSASHYTYITLWDLELGNVSRRRRNEPKVCALAMTDDASRVAFATEDNFLKI
WDPFRRSSHRSIPGYSGLEMANPPNDCCQSTTLYLTMGGKRAILYANSLSVWDLEAEYVL
MVFTPDAKFQCCTVALGGQVIVVGMRDSSTIITMRVKPSGSNRVADRDIFGERNESCDDT
SDDELS*
Nucleotide sequence
Length: 5,961
>Haaura.CG.MTP2014.S1002.g07357.01.t
ATGCGACCGAAGCCGGATAGATCGAAGGAGGACAACTTATCTTGTTTACCCCCTATCTGG
AATATAAGCACCAAAGTCGAACGACCAAATACCGATCGAATCTTGAACAGAAGGAGTGAC
GCGAGAAAAAATCTTAGTTATAAAAACGATCAGAAAATCATTGAACATCTTCGGCAAAAG
TTGAATCGCAAAGACGAAAGCAATTTGTCAGCATCATGGATAGCTAGTCAACGTAATGAC
CAGGCAACGAAAAGTGTCCACCGCGATATGTCGCCTGAAAAAACATGTATCATCACGGAA
AGAATGAATTCACATATAGCAATGAACGGAACTACCAGCAGCAGCATGTCAAAGGGCACC
AGCAGACGAACATTGTCACCTTATGACAGTATGAACAGCCAGCTTGTTCTTCCATCAATC
GTCATAGATGAGCATGACTCGGTCTTCTATGAAGAGCAAGATGCCCCCGCAGCATCAGAT
GTTGTCGCTCGAACAATTTCGACTCCCGGAATATTCGTCGATTGGAAAAGCGATGACAGT
AGCGATTTTGAAGAAGTCTTCAGATCTGAAGAGGAATTCACAGAATCCAATGCATCGGAT
ATTCACGTTAGTTTAGAATCAAGGAATGCACAGAAAATTGGTAGGAATGGATCAGAATCA
AAATCATCAGGAAAAGAGGTTCTTCACTCTGTAGTTATGGGCAATATATATCAGAATCTT
CCAGAACTCAGCAAAAAAGTTAAAATATATTTGAGTCACGGCGGAATCAATACTGAAACG
GAACAAAAAATCTTCATGACTGAGGTGTTTCCACGAATATCACAGCTATGTCGAGGCTTG
GGACTCTCCTTTGAAGTTGTGGATGTGGGTTATGAAGCTGCCGGGACTAAAATAGCTATT
CATTATATGTTAGATGCATTGGAGACAAGTCTAGGGACCGCATTTGTGAGTTTCATTTCC
GATGAATCGGATGCTGAGAGTGAAGCACCTCCAAAATTTGTGCCTAGCGACGTCATGACA
AAAATATTCAACATCATCCAGCTTGAGATAGTGGCAACAGAAGCGAGTATTTGCTGTCGA
AGAACGAACCAGCTTCCCGTATCTGGCACTGATCAAGCTGAACCCAAAGCATTGTTGGAT
ATTCTTGAAAAAAAAGTCGAGCATTGCCAAGGAAACAGAGAGTTGATCCTGAAGCGTTAT
GATTTGGATTCTAATGCAATTCCGGAGGAGTTTGTGCTTAGGCAAAGTATAAGCTCACCA
CTGGAAACTGTCAAACTCTGTCTAGCTTTGAAAACATATAGCAAGCGGTTACATGCTGAC
CCGAGTGTGAGAAAATGGAGGGATCATGCCTTGCGGACATCTTCAAGTAGAGAGAATCTG
ACTGCACTAAATGAATCAAAAGATCCAAGAAACAATTGTGTTTGGTTCTGTCAAAAGCAG
TCTGGTATGAAGGGATCGATCCCGAGTGAAGTTCGCAGTAAAAACTCGAGAGAAGTTACC
CTGAAAAGCACTTTGAAAAGCAGGCTTAGCTGCAACAACCTGCAAACATATCAGCTTGTA
AAAAATGAAGAATCTCAAACAAACTGGAATGAGGGAAAGAAATCTGATCTTGAGAAAATA
AAACATAAACAATCTGAGAAGTTCTCCTTTGATATCTACAATACAATATCCCTTCAAGTC
AAACGAGCTCTTGAGGCTGAAGAAAACAATTCTACTATCACGAAAGACAATTATGAGCTG
ATTGAACATGTAAGATTCATGGGTGAAGCCAACAGAAACTTCATAGGCAGGGAAGACGTC
TTAGAAGAAATTAAAAACTACATTCTTTCTGATGGAAAAAGGTCTCCAATGGTGTTATAT
GGAGAGCCGGGATGCGGGAAGACTTCAGTCTTATGTGCTGCTGCGAAGCAATGCAGAATA
TGGGTTAATAATGGTACGAAACTACCGCCTATTGGCATGCACCGACATGCAAGGCCATCC
GTTGTAGCTGCAAATTTCCACAAAAAAATACAGCAACATATTGTCATATTCAGGAGTGTT
GGTGTTACTGGAGAAACAAAATCACTGACATTTCTTATTCGCGACATTACACGACAACTG
GAAGCTATTTACAAAACCCGGAGAGAAGAAGACAATATTTCGCATCAGCGCTTATTTTCT
GATTTACCCTCCCATTCCTTGAGCAACCTCGCAGCCTTCCTCAGTCGACACAGGCAATAC
GTTTTGCTCTTTATTGACAATCTTAGTGCGGCCACTGATGTCAAAGATAGATACTCACTG
TCTTGGCTACCAAAACCCCTTCCAAAATATTTCAAAGTCATCTTCTCATTCACATGCAAA
GGGAAAATCGACCCTGGTGCTTGCGAAATCTCCACACCGAAGAGTTTGTTTGAAGCTTGC
TTGAAGCATTACAAGGACGATTTGTATTTGGTCGCTATTCCTCCGTTAGCTTTTCAGGAA
ACCCTGCAATCAGTTGACTTTGGAAGACCTACAAAAGGACTCGATTTATTGCTTTCGTTC
TTGTGTCAAAATGAGCGGAGAATAACTAAGGAGCAACAGAGAGTAATCATGAAAACGGCT
AACTCATGCACAACACCTTTGGCTTTAAAATTGCTTGTGGGAATCGCTCGTCATTGGAAA
TCTTATACACCCCGGGAAAACGTTATCAATGACATGTCAGGATGGGGTTCACACATCCGT
GATTTCATCTGTCATTTTCTTTCTGTTGTTGCTTCTAAGCACAACCAAAATGTTTTTAAA
GCATTTACTTGTTTCATTACATGCTCAAAAAATGGTCTGACTCATCAAGAGATCGTAGAT
CTTATTTCAATGGATAAAAAAGTAACCAGGCTCTTGCTAGGAGGACGAATAGCAGTACCT
CAAGTCAAAGAAGACAGCAATACATCGCGTAGCAAATCAAGAAAGGACAATAAAACGGTG
AAGGTAATTAGCTCGGGAAGATGCGATACGGTGTGCCAAATTACTGGAATGTGGTATCTT
CTACGCCAAGATCTAGAGCCTTTTCTCATGGAAACCCTCACCGATAATGTGAAAACCATC
AAATGGCGGCATGCGATCTTTGCTGAGCAAATTATGAAAATGTTCATGTCAGAGCCGAAA
GACCTACGTCATTTTCATGTGATCATGACATCATATTTTTCCAATGAACCTACCCAGTGC
ATATGTGGGTCTATTCATGACTGTGGGCAACCTTTGCAGTGGTCTGTTGGCTCTCACACT
ACGCTGAATCTGCGACGGTTGAGCGAATCTATATTTCATGCGAGGCTCTGTGCTGACATT
GAACCGATCAAGCGTAAAATGATCTTTGACCTGAACTGGCTTCAGGCAAAACTGGATGCA
ACTTCAATCGAGTGTTTGCTGAGTGATATATATGAAGTGCTGAAAATGGTTTCCAATGAT
AAGGATATCAACCTGCTGGTGGAGGCCTTGTTTTTGTCTCAGGATGTGTTACGTCATGAC
CCTCGTGAACTCCCATCGCAGTTGCTTGGTCGTCTGCATGACATAATCGAAAAAGATGTA
CCCCTCGCCCCACAAGATCCACGCCTATATCCGTATACCCGGTTGCTTCTTTCACAAATA
AGACGCTCTAAGCGATACTTCCTAATGCCGACAAAAACGTGTCTGACATCTGGAAAGCAA
ATTATCTTCGATCCACTCCATGGTTCTGATGATGTTATCACCGCTCTTGTGTCATGTACC
GACGGACAGCGGATAGTTACTGCGGCAAAAGATTCAACTATCAAGATGTGGGACATTATA
TCCAGACGTGTTCTTCGAACTATTGAGAATGTTGGCAGAGATGTGATTGCTATGTGTGTG
TGCATGGGAAATTACTTTGTTGCCACGCTTCACAGAAATAGTCAAGTGAATGTTTGGAGC
TTTCGTCAATGCTCGTGCATATTTTCTATCTCGTGCTACACGAATGAGGACAGATTGCTC
ATCACAATTGTCTCAGATGGCCAACTTCTGGCAACACTTTCTCAAAAGTCAATGACAATG
CGTGTTTGGGATTTGGATAAGCTCTGCTTTACTCGTGAAGTGAGCATCGGATCAGAGGAG
GTTGATGTAAGGAATCTGACAGTTGCTCGCAATTCCCGGGGTAACAATGTGTTTCTCGGC
TACCTCGGACACTCCGAAGCGATTACTGTCAATGCTAAGCGAGGGAAGATTGTAAGAACT
ATCAAGTGTAAGGATGGTCGTATAACTCAAGTGGAATCATCGCGCGATTACTATATCATC
GGTTGTCGTAAAAAACAGATGGAAGTCCATGAACTCCAGCATTTCTACCTCCATGACAGC
ATTAATTATGGCCTTGTACGCGTCATCAAGGCTTGTGTTGATGATACGATTTACGACATG
TTCGTTAACCGCCTCGGCTCTCATTTGATCGGACTATCTTTAAATGTAGACGGTGAAAGC
GAAATTGTTGTTTGGAGCATGGAGAATGATGCACACCGACATATGGTGAAGAACAAGGGA
AAATTTATTGCAGGCACTTGCATTGATCTCCAATACTGCATAACAGCAGGAGAGTCAGAA
AACGTTGTTCGGATCCATAATCTTGCCGCTCAGTTTGACAAACACACTCACAGCCGAACA
CAGGTCAAGAAAAAGGTGGATGGGATAGGCAGACTCTTCAACCTACCAGAAAAAGATAAA
TATGTCGTGGCTCAGGGCATTGGTGGAAGTCCAATCACAGTTTGGAATGTGACTAGAAGC
AAGTGTCGTGGAGAAGCTGTCATTATCGAGCGAGGACTTCTGGACAAGCACGACATTGTA
ATCGTAAAGGACATGCTTGTCGTCATTTTATCCGATCGTGGCATTGCTACAATAAGAAGT
CGTTCTGAAAATATCTTCGAAACTATTTACGTGTACAACTTATTGCTACGAAAATACGAG
CGAAAACTACATCCTGTGCAAATAAACATGTGTCCTCCTGACCAATATCATGTGATTGGA
AATGATAAATTAATAGGGACATCTAGTGACCATCTTCATCTCGTGGTGTGGAGTATAATA
ACAGGAAAGATTTTATACACCATACTTCCCGATTTCTCGTGCTATCAGCAAGAAGAAAAG
ATACTTCATGACAAAAAAAGAAGGCAAAGACCAAAACTACGAAATTACTCCATGGTGCCG
TTTCAACAAAAAAATACCGACGCCAAACGCACCACATGGAAAAAATATAGAGTAACCAAA
GAAGAGCAACAACAGGCAATATTCGAAATGGTTGTCAGTGGCGACGAGTCAATTTTACTT
TGCTCATATTACTCTCGTCACATTGTGGTATTCAACTTGAAAACACGATTGCATAAGCTT
ACACTGACAGACAAACATTCGATCTTGAATTTGCATAAGGCCATCTTGGCCACAGATGGA
AAGCACTTGTTAATGACCAACTATGACAGTGCTTCACATTATACTTACATAACTCTGTGG
GATTTGGAACTCGGAAACGTCTCAAGACGCCGTCGCAACGAACCGAAAGTATGCGCCTTG
GCTATGACAGATGACGCATCCAGAGTGGCGTTTGCAACAGAGGATAATTTCCTCAAGATC
TGGGATCCCTTTCGTCGAAGCAGTCATCGTAGTATACCAGGATATTCTGGACTTGAAATG
GCAAACCCTCCAAACGATTGTTGCCAATCTACAACACTGTACCTGACGATGGGCGGAAAG
CGAGCAATTTTGTACGCCAATTCTTTGTCAGTCTGGGATTTGGAAGCTGAATATGTGTTG
ATGGTTTTCACACCAGACGCTAAGTTCCAATGTTGTACCGTAGCTCTGGGTGGCCAAGTC
ATCGTGGTAGGTATGCGAGATTCATCCACTATCATTACAATGCGTGTGAAACCTTCTGGG
AGCAACCGCGTCGCCGACAGAGATATATTCGGAGAACGTAACGAATCGTGTGACGACACA
AGCGATGATGAACTATCTTAG
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[589-659] 1.35E-10 - T[716-754] 1.35E-10 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1211-1364] 2.6E-14 - T[1371-1723] 7.0E-7 - T[1725-1964] 6.1E-11 |
| SMART |
WD40_repeat (IPR001680) - T[1219-1258] 0.0027 - T[1261-1300] 7.8 - T[1303-1344] 110.0 - T[1394-1431] 170.0 - T[1732-1772] 95.0 - T[1824-1862] 13.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1226-1309] 13.475 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[1226-1584] 1.02E-22 - T[1651-1712] 7.14E-16 - T[1747-1949] 7.14E-16 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[1226-1267] 12.413 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[1245-1259] . |
| Protein Name | Identity | Bit Score | e-value |
|---|